Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1645 |
Symbol | |
ID | 4282496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1869445 |
End bp | 1870077 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638138522 |
Product | redox-sensing transcriptional repressor Rex |
Protein accession | YP_754315 |
Protein GI | 114567161 |
COG category | [R] General function prediction only |
COG ID | [COG2344] AT-rich DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.301525 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGTCT TCAAAATTCC GGAAGCAACA ATTATGAGGC TCTCAATCTA TTCCCGCTAT CTCAGGCAAT TGATCGAGGA AGGCGTGGAA ACAGTTTCAT CGGGCGAAAT CGCTGCTGGC GTAGGCGTTA GTTCGGCCCA GGTGAGAAAG GATCTGGCTT ATTTTGGCGA GTTTGGCACT CGTGGGGTAG GATACAAGGT AGAAGACCTT TATGGCTGTT TATTAAAGAT TTTAGGACTG GACCGGAGAT GGAATATTAT TATCATCGGC GCTGGCAAAT TGGGCTCGGC CTTTGCCCTA TACCAGGGTT TTCTGGACCG GGGATTTACT ATAAGTGCGA TCATGGATGT GGATGAGAAA ATAATTGGCA GCGAACTGGA TGGGGTAAAG ATTGAACCTT TGGAATTGCT ACAGCAGAGA GTGACGGAAA AAAATATTAC AGTGGGGGTA ATTACGGTGC CTGCTCCTGC GGCCCAGGAT GTTACCGACC TCCTGGTAGC CTCAGGGGTA AAAGCTATTC TCAATTTCTC GCCGCGGGTA CTCAAAGTAC CCAATGATGT TATACTGAGA AATGTAGATC TATCAGTTAA CCTGGAACTT TTAAGCTTTT ACCTGGCATT GAATAACAGG TAG
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Protein sequence | MKVFKIPEAT IMRLSIYSRY LRQLIEEGVE TVSSGEIAAG VGVSSAQVRK DLAYFGEFGT RGVGYKVEDL YGCLLKILGL DRRWNIIIIG AGKLGSAFAL YQGFLDRGFT ISAIMDVDEK IIGSELDGVK IEPLELLQQR VTEKNITVGV ITVPAPAAQD VTDLLVASGV KAILNFSPRV LKVPNDVILR NVDLSVNLEL LSFYLALNNR
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