Gene Swol_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1645 
Symbol 
ID4282496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1869445 
End bp1870077 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content46% 
IMG OID638138522 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_754315 
Protein GI114567161 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.301525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGTCT TCAAAATTCC GGAAGCAACA ATTATGAGGC TCTCAATCTA TTCCCGCTAT 
CTCAGGCAAT TGATCGAGGA AGGCGTGGAA ACAGTTTCAT CGGGCGAAAT CGCTGCTGGC
GTAGGCGTTA GTTCGGCCCA GGTGAGAAAG GATCTGGCTT ATTTTGGCGA GTTTGGCACT
CGTGGGGTAG GATACAAGGT AGAAGACCTT TATGGCTGTT TATTAAAGAT TTTAGGACTG
GACCGGAGAT GGAATATTAT TATCATCGGC GCTGGCAAAT TGGGCTCGGC CTTTGCCCTA
TACCAGGGTT TTCTGGACCG GGGATTTACT ATAAGTGCGA TCATGGATGT GGATGAGAAA
ATAATTGGCA GCGAACTGGA TGGGGTAAAG ATTGAACCTT TGGAATTGCT ACAGCAGAGA
GTGACGGAAA AAAATATTAC AGTGGGGGTA ATTACGGTGC CTGCTCCTGC GGCCCAGGAT
GTTACCGACC TCCTGGTAGC CTCAGGGGTA AAAGCTATTC TCAATTTCTC GCCGCGGGTA
CTCAAAGTAC CCAATGATGT TATACTGAGA AATGTAGATC TATCAGTTAA CCTGGAACTT
TTAAGCTTTT ACCTGGCATT GAATAACAGG TAG
 
Protein sequence
MKVFKIPEAT IMRLSIYSRY LRQLIEEGVE TVSSGEIAAG VGVSSAQVRK DLAYFGEFGT 
RGVGYKVEDL YGCLLKILGL DRRWNIIIIG AGKLGSAFAL YQGFLDRGFT ISAIMDVDEK
IIGSELDGVK IEPLELLQQR VTEKNITVGV ITVPAPAAQD VTDLLVASGV KAILNFSPRV
LKVPNDVILR NVDLSVNLEL LSFYLALNNR