| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1620 |
|---|
| Symbol | |
|---|
| ID | 4283664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 1845109 |
|---|
| End bp | 1845807 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638138499 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_754292 |
|---|
| Protein GI | 114567138 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAT TTAAAGAGGT GTCGAAAAGG TTTGGTAGTA CACTGGCCCT GGATAAGTTG
GATGCAAATT TCCCCACTGG TAAAATAATT GGTCTTTTTG GTCCCAATGG AGCAGGTAAA
TCAACCAGTA TTAAAATGAT AGCAGGGCTC AATCGTCCGG ATCAGGGGCA AGTAGTGATA
GACGGTGAAT TGCCGCGCAT GAGCAAAGCC CAAATAGCCT ACTTGCCGGA AATAGATCAT
TTATATCCTT GGATGACTAT TGGCCAAGCG GCCGGATTTA CCCGAAGCTT TTATGTGGAT
TGGGATAACG ACAAATACCA TGAGCTTTTA AAATACTTAA ACCTGAATGC GGAAATGAAA
ATAGGTAAAA TATCCAAAGG TCAGAGAGCT AAAACCAAGC TATTGCTTAC CGCTGCCCGG
CGTGCCCCTT ATCTGTTAAT GGATGAACCA TTATCAGGTA TAGATATTTT GACCCGAGAA
GAAATAATAA ACACTCTGGT AAGAGATTAT CGGGAAGGGG AACAGACCAT AATAATATCC
ACTCATGAGA TTGCCGAGGT GGAGAGCCTG GTTGACGAAG TGTTTTTTAT TGATCAAGGA
AAGATTATGC TATCCGGATC GGCGGAAGAA TTCCGAGTGG AAAGGGGTCA ATCTCTGGTA
GAAATAATGA AGGAGGCGTT TCGCCATGCC GACCAGTAA
|
|---|
| Protein sequence | MIEFKEVSKR FGSTLALDKL DANFPTGKII GLFGPNGAGK STSIKMIAGL NRPDQGQVVI
DGELPRMSKA QIAYLPEIDH LYPWMTIGQA AGFTRSFYVD WDNDKYHELL KYLNLNAEMK
IGKISKGQRA KTKLLLTAAR RAPYLLMDEP LSGIDILTRE EIINTLVRDY REGEQTIIIS
THEIAEVESL VDEVFFIDQG KIMLSGSAEE FRVERGQSLV EIMKEAFRHA DQ
|
|---|
| |