Gene Swol_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1564 
Symbol 
ID4282432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp1784066 
End bp1784536 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content41% 
IMG OID638138444 
Productmetal-dependent hydrolase 
Protein accessionYP_754238 
Protein GI114567084 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCA TGATAATAAA CCAGCAGAAC AAGATTAATT ATACCAAGGA AATGCAGCAG 
GTTATTCTCA ATGTGGCCAA TGCCGTGGCA AAAATGGTGA AATTGTCCCC GAATACGGAG 
TTAAGTGTTA TGATTGTGGA CAACAGCTAT ATTAAAGAAT TGAACTTGAT TTATCGTGGC 
GAAAATAATC CTACTGATGT TCTTTCCTTT GCCATGAATG AACTTAGTGA AGAGGAGATG 
GATCTCGACC TGCCGGGAGA AGTAAATGTT CTCGGAGATA TCGTGGTTTC TCTGGAAAAA 
GCGGTCAGCC AGAGTGAAGA ATATGGCCAT AGCGCAGAAA GGGAACTCGG TTATTTGATT 
GCCCATGGTA TGCTTCACCT CCTGGGCTAT GATCATGAAA ATGAGGAAGA ACGTAACTTA 
ATGCGTAACC TGGAAGAAAG GATCATGCAT AAAGTTAAAT TGGAAAGGTA A
 
Protein sequence
METMIINQQN KINYTKEMQQ VILNVANAVA KMVKLSPNTE LSVMIVDNSY IKELNLIYRG 
ENNPTDVLSF AMNELSEEEM DLDLPGEVNV LGDIVVSLEK AVSQSEEYGH SAERELGYLI 
AHGMLHLLGY DHENEEERNL MRNLEERIMH KVKLER