Gene Swol_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1554 
Symbol 
ID4282812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp1775649 
End bp1776722 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content49% 
IMG OID638138434 
Productmolybdenum ABC transporter, ATP-binding protein 
Protein accessionYP_754228 
Protein GI114567074 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGATA TAGAGATTAA GAAATCACTG CCTGGCTTTA AACTGGAGGT ATCTTTTGCC 
GTGGAGCGAG AGATACTGGC TATTTTAGGT CCTTCCGGCT GCGGCAAGAC CATGACCTTG 
AAGTGTATTG CCGGTCTGAT ACAGGCGGAT GAGGGGCGGA TAGCCCTGGA CGAAAAACTG 
TTGTTTGATT CCAGCAGTGG GGTTAATATT AAGTCCCGGG AAAGAAATAT GGGTTTTGTT 
TTTCAAAATT ATGCCCTTTT TCCCCATATG GATGTTTTTA ATAATATCGC CTTTGGCATA 
CGGCAATTGC CGGTAGAGGA TGTTAAAGAA AAAGTCAGAC TCTGGCTGCA GAAAATGCGT 
TTATCCGGTT TGGAGAAGCG TTATCCCGGG CAGTTGTCTG CCGGGCAGCA ACAGCGGGTG 
GCCCTGGCCC GGGCTCTGGT TTCCGAGCCG GAAGTGCTCT TGCTTGATGA ACCTTTTTCC 
GCATTGGACA GTATTGTTAA AGAGCGGCTG GAGGAAGAAC TCTTGGAAAT TCATGAATTT 
TTCCCCGGCC ATATCCTTTT TGTAACGCAT AACCTGGCCG AAGCTTATAA ACTGAGCTCC 
AAGATAGCAG TATATGAAGC CGGGCGTTTG CTGCAATTCG GAGAAAAAGA AAAGGTGATC 
AACCGCCCCT CCAACCGAGT CGCAGCTCGC CTGACCGGGG TTAAGAACTT CCTCCCGGCG 
GTTGTCCAGG AAGTGGAGAG TAGCAGCCTT AATCTGGAAT TGAGTGGCCT GGGAACCAGG 
CTCAAGGTGG AAAGGGCAGC GGGAGAAGAG TGGAAAACGG GGCAGGTAGT TACTTTGGGC 
ATACGCCCGG AGTATATTCA GATTAAGGAC AACGGGGAAA ACATCATAGC AGTTCTGGTG 
GAAGAGGTCA TAGAAGAGAT ATCCAGTTAT ATAATCCGCT GCTCGCTTGC GGGAAGTGGG 
GGCGAAAAGA TTTTGGAAGC ACGAATACCT CGAACAGAAG CTATTAACCT TAGCCGAGGC 
GATAGCTACC AGTTCAATTT ACCGGCGGAC AAAATCTTCA TTATGCTTGA ATAA
 
Protein sequence
MLDIEIKKSL PGFKLEVSFA VEREILAILG PSGCGKTMTL KCIAGLIQAD EGRIALDEKL 
LFDSSSGVNI KSRERNMGFV FQNYALFPHM DVFNNIAFGI RQLPVEDVKE KVRLWLQKMR 
LSGLEKRYPG QLSAGQQQRV ALARALVSEP EVLLLDEPFS ALDSIVKERL EEELLEIHEF 
FPGHILFVTH NLAEAYKLSS KIAVYEAGRL LQFGEKEKVI NRPSNRVAAR LTGVKNFLPA 
VVQEVESSSL NLELSGLGTR LKVERAAGEE WKTGQVVTLG IRPEYIQIKD NGENIIAVLV 
EEVIEEISSY IIRCSLAGSG GEKILEARIP RTEAINLSRG DSYQFNLPAD KIFIMLE