| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1547 |
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| Symbol | |
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| ID | 4282805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1764923 |
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| End bp | 1767892 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638138427 |
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| Product | type III restriction system endonuclease |
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| Protein accession | YP_754221 |
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| Protein GI | 114567067 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3587] Restriction endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTAA AATTTGTTTC CGACCAACAA TTCCAGTTGG ATGCCGTTGC CTCAATAAGC
GACATCTTTC AAGGTCAGGC AGTAAAACAG GCTAATTTCT CGGTTGCTTC CACCATGGGC
AGTAGCGCTC AGGGTGAATT AGGTTATCAG ACCGAACTTG GTTACGCTAA TAAACTGGAC
CTGTTGGATG ACGAACTGCT GGAAAACATT AATCGCATCC AACTGCGCAA CGGCTTACCT
AAAAGCACTG ATATCCAGGG GCGCAATTTT ACCGTAGAGA TGGAGACCGG TACCGGTAAA
ACCTATGTTT ATATTCGTAC TATCTATGAG CTTAATAAGC TTTACGGATT TACCAAATTT
ATTATTGTGG TTCCTTCAGT AGCTATCCGT GAAGGGGTTA ATAAATCCCT GGAGATTATG
GAGGAGCATT TTAAGAGCCT CTATGAAGGC GCCAACTGTG ATTATTTTAT CTACGATTCC
TCCAAGCTGG GCCAGTTAAG AACCTTTGCT ACCAGTTCCA ATATTCAGAT TATGGTTATT
AATATTGATG CCTTCCGTAA AAGCTTTGTG GACCCCAATA AACCTGATAA AGCTAATATC
ATCCACCGCG AGCACGACCG TATGAATGGG CGCAGACCGA TTGAATTTAT CCAGCAGACC
AACCCCATTG TAATTATAGA TGAACCGCAA AGTGTGGATA GAACCGATAA AGCCAAGGAA
GCTATTGCAT CGTTAAATCC CCTTTGCACT TTACGCTATT CCGCCACCCA TGTGGAAACC
TATAATCTGA TGTATTGCCT GGGACCGGTA GATGCTTATC AAAAAAAATT GGTGAAAGAA
ATTGTAGTAG ACAGCATTAA GGAAGCCGGA AACTTCAACC GGCCTTATAT TCGCCTGGTA
TCGGTCAAAA ACAGTAATGG CTTCCAGGCC GTTCTGGAAC TGGACATAAA GAACCGTTCC
GGCGTGGTAC AAAGAAAGCA AAAAACAGTC AGAGTAGGGC AGGACCTGTT TGATATATCC
GGGGAAAGAG AAATTTATTC TGGTTATATT ATTAACAACA TTGACTGTTA CCCTGGTAAT
GAGATGGTGG AATTCACCAA TGGTAGCCAC CTGCCGTTAG GAATGGAAAT GGGCAACATC
AGTGGGGATG ATATAAAACG GGGTCAGATC AGTGCCACCA TCAAACACCA CCTGGACCGG
GAACTACGCC TGGTTCCCCA GGGAATAAAA GTCCTTTCCC TCTTTTTTAT AGACCGGGTG
GACAACTACC GCATATATGA TAGTAACGGT AATCCCCAGA AGGGCAAGTA TGCCTTAATG
TTCGAGGAAG AATATAGTAA GCTGATTAAA CTCCCCAAGT ACCGCACCCT TTTTGAAGAC
CATAATTATA TGCTTAATGA CGATCCATCC ATGGTTCATG ATGGCTATTT TTCTATTGAC
AAAAAGGGAA GAATTAAGGA TACACGTGGT AATACCCTGG CTGATCACGA CACCTATAAT
TTGATAATGA AGGAAAAAGA AAAGCTGCTC AGTTTTGAAA CCCCGTTGCG TTTCATCTTT
TCCCATTCAG CGCTCAAAGA AGGCTGGGAT AATCCCAATG TCTTTCAGAT ATGTACCCTG
ATTGAAGCCC GGGAAACCCT AACCCGCCGG CAAAAAATTG GCCGCGGCCT GCGCCTTTGC
GTCAATCAAG AGGGGGAAAG GATATTTGAC CCCCAGATTA ACACCCTGTC AGTTATGGCC
AATGAATCTT TTGCCGAATT TGCGGAAAAC CTGCAGAGCG AAATGGAGGC CGAAACCGGT
GTCAAATTTG GCTTTATTGA GAAACATGCC TTCGCAGGTA TATCCTATAC CGACGACTCC
GGAAAAATTG AAAACCTGGG TTATGAAGCA TCAGAGAATC TATGGGGTTT TCTTTTAGAA
GAAGACCTTA TTTATACAAC TGGAAAAGTT AAACTGGAAT TAAAAGAACA AATTGCCAAC
GATACCTTTC AGGTGCCGCC AGAATTTGAG CATGTAGAGC AGGAAATCAA ACAGGTAATA
CGGCAGTCGC TAAATAAATT GCCCATACGT AATCACAATA ATGAAGTTAC TGCCCAGTTG
AACAAACGGG TTTACCTGGG ACCGGAGTTT GAATCCCTGT GGAACCGCAT AAAATTCCGT
ACCACTTATT CAGTTGCTAT GGATATTGAA AAACTAGTGC AAGAATGTGT GGATGCCATT
AACAGAATGC CGGCCATACC CAAAGTTCGC CTGATTCAAG AGAGCGCCCG AATTGATATT
AACCAATCAG GTGTTTCTGG AGAATTGACC AGTGTAAAAG TTCTGGACCA GATTGACATC
AAGCATTCCT TGCCCGATAT CCTGCGTTAT CTCCAGGATG AAACCAGGCT GACCCGAAGA
ACCATCGTAA GAATACTCAT CGAAGCCCGA AGGTTGGAAG ATTTCAAAAA TAATCCCCAG
AAGTTTATGG AAGCCGTAAG TGACATCATC AAACAAAGGA TGAAACTTAT GATTGCCGAC
GGCATCAAAT ACGAACGAGT CGGCAATCTG GAATTTTACC GGCAGGAACT GTTTGAAATG
CAGGAACTAA AAGGCTATTT AAAATCCAAT GCCATAAAAG TAGAGAAATC AGTTTATGAC
TACCTCATTC TGGATTCCAA TACGGAAAAA GAATTTGCCC AAATGCTGGA ACAAGATGAC
GAAGTAAAAG TCTACACCAA ACTGCCGCCC AAATTCGTCA TAGAAACCCC CATCGGTAAC
TACAACCCGG ACTGGGCAGT GCTGGTAGAC AAAGACGGCA CCGAAAAACT ATATTTCGTA
GTAGAAACCA AAGGCAGCAC TGACAGCGGC CAGTTAAGAC TATTTGAAAA CTATAAGATA
GAGTGCGGCA AAAAACACTT TGCCGCCCTG GAAACTGGAG TTACTTATGA AGTAGCCAAA
GATTATGCGG AGTGGAAGTT GGGAATTTAA
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| Protein sequence | MKLKFVSDQQ FQLDAVASIS DIFQGQAVKQ ANFSVASTMG SSAQGELGYQ TELGYANKLD
LLDDELLENI NRIQLRNGLP KSTDIQGRNF TVEMETGTGK TYVYIRTIYE LNKLYGFTKF
IIVVPSVAIR EGVNKSLEIM EEHFKSLYEG ANCDYFIYDS SKLGQLRTFA TSSNIQIMVI
NIDAFRKSFV DPNKPDKANI IHREHDRMNG RRPIEFIQQT NPIVIIDEPQ SVDRTDKAKE
AIASLNPLCT LRYSATHVET YNLMYCLGPV DAYQKKLVKE IVVDSIKEAG NFNRPYIRLV
SVKNSNGFQA VLELDIKNRS GVVQRKQKTV RVGQDLFDIS GEREIYSGYI INNIDCYPGN
EMVEFTNGSH LPLGMEMGNI SGDDIKRGQI SATIKHHLDR ELRLVPQGIK VLSLFFIDRV
DNYRIYDSNG NPQKGKYALM FEEEYSKLIK LPKYRTLFED HNYMLNDDPS MVHDGYFSID
KKGRIKDTRG NTLADHDTYN LIMKEKEKLL SFETPLRFIF SHSALKEGWD NPNVFQICTL
IEARETLTRR QKIGRGLRLC VNQEGERIFD PQINTLSVMA NESFAEFAEN LQSEMEAETG
VKFGFIEKHA FAGISYTDDS GKIENLGYEA SENLWGFLLE EDLIYTTGKV KLELKEQIAN
DTFQVPPEFE HVEQEIKQVI RQSLNKLPIR NHNNEVTAQL NKRVYLGPEF ESLWNRIKFR
TTYSVAMDIE KLVQECVDAI NRMPAIPKVR LIQESARIDI NQSGVSGELT SVKVLDQIDI
KHSLPDILRY LQDETRLTRR TIVRILIEAR RLEDFKNNPQ KFMEAVSDII KQRMKLMIAD
GIKYERVGNL EFYRQELFEM QELKGYLKSN AIKVEKSVYD YLILDSNTEK EFAQMLEQDD
EVKVYTKLPP KFVIETPIGN YNPDWAVLVD KDGTEKLYFV VETKGSTDSG QLRLFENYKI
ECGKKHFAAL ETGVTYEVAK DYAEWKLGI
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