Gene Swol_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1538 
Symbol 
ID4282796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1756676 
End bp1757455 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content48% 
IMG OID638138418 
ProductGTP-binding protein, HSR1-related 
Protein accessionYP_754212 
Protein GI114567058 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0370] Fe2+ transport system protein B 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTA ATACCACCCC TTTATCTGAA TCTTCTAAAA ATAACCCGGA TAAGCAAAAT 
AATTTCGTTA TAGCCCTGGC CGGAAACCCC AATGTGGGCA AGAGCACCGT ATTTAACCGC
CTAACCGGGC TGAAACAGCA TACCGGCAAT TGGCCAGGGA AAACGGTAAT AAAGGCTGAA
GGTACTTTTT CCCACCGTAA CCGGCATTAT ACCCTGGTGG ACCTGCCCGG AACCTATTCG
CTGCACGCCA GTTCTTCCGA TGAAGAGGTA GCTCGCAATT TCATCTGTTT TTCCCGCCCT
GATATAACTC TGGTAGTATG TGATGCCACT TGCCTGGAGC GCAACCTGAA TCTTGTATTA
CAGATATTGG AGATTACCGA CCGGGTGTTA GTCTGTGTAA ACCTTCTGGA TGAAGCCGAA
AGAAAAGGAA TTCAGGTAGA TATAGCCATG CTGGCCCGGC AGCTGGGAAT ACCGGTAGTC
GGTACCGCCG CCCGCAGCGG GAGGGGTTTA GAGAGCTTAA AAAATGTTCT GGACGATATG
CTGGCCGGTA AAATAGCCAT CCAGCCGCGG CAACTTGTTT ATGATCCGGA GCTGGAAGCG
TCCATAAATA GAATTGAAAA AAGACTGGCT CCTTATCTAC CAGCTTGGAT TAACAGCCGC
TGGGTGACTC TGCGGGTATT GGAAAGGGAT TTCAGCATCC TGGAGCATAT AAGCAACCAT
AAGAATAATG ATTTTCCCCG GCAAGTATTG AAAGAGGAAG TGGCCTTATG TCTGCGATAA
 
Protein sequence
MAINTTPLSE SSKNNPDKQN NFVIALAGNP NVGKSTVFNR LTGLKQHTGN WPGKTVIKAE 
GTFSHRNRHY TLVDLPGTYS LHASSSDEEV ARNFICFSRP DITLVVCDAT CLERNLNLVL
QILEITDRVL VCVNLLDEAE RKGIQVDIAM LARQLGIPVV GTAARSGRGL ESLKNVLDDM
LAGKIAIQPR QLVYDPELEA SINRIEKRLA PYLPAWINSR WVTLRVLERD FSILEHISNH
KNNDFPRQVL KEEVALCLR