Gene Swol_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1518 
Symbol 
ID4281877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1740199 
End bp1740924 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content47% 
IMG OID638138398 
Producthypothetical protein 
Protein accessionYP_754192 
Protein GI114567038 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3409] Putative peptidoglycan-binding domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAACCT ATATCACTCT GGGAAGCCGG GTATTAAGAC GAGGCGATGA AGGTACGGAT 
GTCGAGCTTT TGCAGAACCT GCTCAAAATC TTACCCGATC CCATTGGTTC AGGTATAAAA
GAAAAAGGGG TATTTGGTAA AGAAACAGAA AACGCGGTAA AAAAATTTCA GAAGTATTTC
AATCTGGCCA TAGATGGGAT AGTGGGAGCT AACACCTTTC TTTTTTTAGG TGTACCTACT
GCTTCTTATA TCCCCCCTGG AGGCAATCTC TTCGGAGCCC GTATTTTGCA AAAAGGCAGT
TATGGCTATG ATGTCTGGGT CCTGCAAAAT CGCCTGGCCA CCACCGCCAA AAAATTTGCC
GATACTCTGG GGCAGCCGGC AAACAGAAAT TTTGACAGTA AGACGGAATC TGCCGTAAAG
ATGTTCCAGC GTGATGTACA CCTGGAAGGC GATGGCATAG TAGGCCCCCA AACAGTTTAT
CAGTTGTATA ATTATGCTAC CATGGGGGCA CGCATCCTGC AAAAAGGCCG CTGGGACCGC
AACCAGGGGT ATGATGTATA CTGGTTGCAA AGGAACTTGC AAGAGCTGGG CTACTACCAG
GGAAAGCTGG ATGGTAAATT CGGTTCTCAA ACCGAAGCGG CGGTAAAAAA ACTGCAGGAA
GCCTCTGGCA TAAAGGTAGA TGGCATTGTG GGCGCCAATA CTTTTTATCA CCTGGCTAGC
TGTTGA
 
Protein sequence
MTTYITLGSR VLRRGDEGTD VELLQNLLKI LPDPIGSGIK EKGVFGKETE NAVKKFQKYF 
NLAIDGIVGA NTFLFLGVPT ASYIPPGGNL FGARILQKGS YGYDVWVLQN RLATTAKKFA
DTLGQPANRN FDSKTESAVK MFQRDVHLEG DGIVGPQTVY QLYNYATMGA RILQKGRWDR
NQGYDVYWLQ RNLQELGYYQ GKLDGKFGSQ TEAAVKKLQE ASGIKVDGIV GANTFYHLAS
C