| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1507 |
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| Symbol | |
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| ID | 4281866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1725417 |
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| End bp | 1726493 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638138387 |
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| Product | sigma 38 (RpoS) |
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| Protein accession | YP_754181 |
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| Protein GI | 114567027 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000451966 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGG ATAGAAAATT AGCAGAAGCC GTAGTAGCTC TGGCGGAAAA AGGAAAGAAG
AAGAAAAATC TTAGCTATGA AGAGATAACT GAGGAATTGC AAAGCTTCAA CCTGGAAGCA
GATCAAATAG ACGATATTTT TGAGCATCTC CAGAGTCTGG GGATAACCAT AGGAACTGAA
CAGGATGCTG AGCTTGATGA AGAAAATGAG AGTATCGAAA CAGAAGAGGT AGTCATTCCT
GATGGAATTG AAATAGATGA CCCGGTCAGG ATGTATCTTA AGGAAATCGG CCGGGTACCC
TTGCTCATTG CTGCTCAGGA GATCGATTTG GCCCAAAGAA TAGAAGAGGG TGACGAGGAA
GCTAAGAGAC AACTGGTTGA GGCCAATCTT CGCCTGGTGG TAAGTATTGC CAAACGCTAT
GTGGGGCGGG GTATGCTTTT CCTGGATTTA ATTCAGGAAG GAAACCTGGG GCTTATGAAA
GCGGTAGAGA AATTCGACTA TCGTAAGGGT TATAAATTCA GTACCTATGC TACTTGGTGG
ATAAGGCAGG CTATAACCAG GGCCATAGCT GACCAGGCCA GGACTATTAG AATTCCGGTT
CACATGGTGG AGACCATAAA CAAGTTATCT CGGGTACAGA GAAGCCTGTT GCAGATACTC
GGCAGAGAAC CTACTCCGGC TGAAGTTGCG GAGGAAATGG ATATAGCTGT AGATAGAGTT
ATCGAAATAA TGAAAGTAGC TCAGGAACCA GTTTCACTGG AAACTCCCAT TGGAGAAGAA
GATGATAGTC ATCTCGGGGA TTTCATTACT GACGAGGAAG CCGAATCTCC AGAGGAATCA
GCCTCTTTTG TTTTATTAAG GGAACACCTG GATGGAATAC TTAATACTCT AACTGAGAGA
GAGGAAAAGG TATTACGCTT GCGTTTTGGG TTGGATGATG GACGTCCCCG TACCTTGGAA
GAGGTGGGAC AAGAGTTTGG AGTTACCCGG GAACGTATAC GACAGATTGA AGCTAAGGCC
TTGCGTAAGC TCAGGCATCC CTCCCGCAGC AAGAAATTAA AAGATTATAT TGAATAA
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| Protein sequence | MKLDRKLAEA VVALAEKGKK KKNLSYEEIT EELQSFNLEA DQIDDIFEHL QSLGITIGTE
QDAELDEENE SIETEEVVIP DGIEIDDPVR MYLKEIGRVP LLIAAQEIDL AQRIEEGDEE
AKRQLVEANL RLVVSIAKRY VGRGMLFLDL IQEGNLGLMK AVEKFDYRKG YKFSTYATWW
IRQAITRAIA DQARTIRIPV HMVETINKLS RVQRSLLQIL GREPTPAEVA EEMDIAVDRV
IEIMKVAQEP VSLETPIGEE DDSHLGDFIT DEEAESPEES ASFVLLREHL DGILNTLTER
EEKVLRLRFG LDDGRPRTLE EVGQEFGVTR ERIRQIEAKA LRKLRHPSRS KKLKDYIE
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