| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1471 |
|---|
| Symbol | |
|---|
| ID | 4282336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 1689654 |
|---|
| End bp | 1690394 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638138349 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_754147 |
|---|
| Protein GI | 114566993 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC TAGTTGCTAT AGATGATACT GATAACATTG ACAGCAGGGG AACAGGAGAA
TTGGCTGATC TCCTGTCAAA ATATCTGCAA GAAACGGGCT GGGGTAAAGG CGGAGCGGTA
ACTCGTCACC AGTTACTGGT TCACCCGGAT ATTCCCTATA CATCTCATAA TAGTTCTATG
TGCTTTGTGG CAGAAATAGA TGCAAGTTAT TTAGCTGCAT ATATCGAGTA TGCGGGGCAT
TTTTTGGAAA AGGAGCGTGC AGAGGGTTCA GACCCAGGCC TCTGTGTGGC TGCTATTGAG
CAGGTAAATT TTCCGGATGA GTTGATAGAC TTTGGTTACC GGGCCAAACA AGTAGTTTTG
ACTAAAAGTA ATGCTTATAA ACTGGCTAAA AAATTGGATA TTCATTTGTC CGAACATGGT
GGTAGCGGGC AGGGGGTTAT AGGGGCTTTA GCCGGGGTAG CTTTACGCTT AACTGCCAAC
GATGGTCGTT TTCGCGGAAA ATTGAAAGTA AAATCCAGAG ATGATCTGCT TAGTGTAGGA
GAAATAAAGA AGCAAACTCC GGTTACAGTA GTCAAGAGTT TGGATGATAT GCTTGTTCTG
GATGATGATA GCATTATTCT CATGGGTGAA AAATTGAAGG CGGTTTTATT GGAAGGACAA
TGTACTTTGT TGGTTGTTCC TACTGGTATG AACGATCCTA AATGGCAAAG CTGTACAACC
AGCCAGTTAA GGAAGTTTTG A
|
|---|
| Protein sequence | MKILVAIDDT DNIDSRGTGE LADLLSKYLQ ETGWGKGGAV TRHQLLVHPD IPYTSHNSSM
CFVAEIDASY LAAYIEYAGH FLEKERAEGS DPGLCVAAIE QVNFPDELID FGYRAKQVVL
TKSNAYKLAK KLDIHLSEHG GSGQGVIGAL AGVALRLTAN DGRFRGKLKV KSRDDLLSVG
EIKKQTPVTV VKSLDDMLVL DDDSIILMGE KLKAVLLEGQ CTLLVVPTGM NDPKWQSCTT
SQLRKF
|
|---|
| |