| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1469 |
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| Symbol | |
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| ID | 4282334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 1686944 |
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| End bp | 1689355 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638138347 |
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| Product | HD-GYP domain-containing protein |
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| Protein accession | YP_754145 |
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| Protein GI | 114566991 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAA ATGACATAAC AGATAACTTC TTGGGCAACT TTCTTGAGCT TTTTCGTCTT
TCGGAAGAGG ACCTGCCTTT GTCTGAACAA AAATACCGGA CAATAGTTGA AAACGCCAAT
GATATAATAA GCGTTCATCG CGCTTCTGAC TTATCTTATC TGTACATAAA TTCTACCGGG
CCCAAAATTC TGGGATGGAG CAAAAAGGAG TTGATAAGGA AAAGCCCCGT GAATCTAATC
CATCCGGAAG ACCTAACTCG AGCCCTGGAA AAGATTAAAA CAGCCGGAAT TGAAGATGGC
TGCACCTGTG AATACCGCTT CCTCAAGAAA GATAGTCAAT ATCTCTGGCT GGAAAGCAAT
GGTAAAAAAA TCCGTTTTAA TGCCGAGACT GTCGCTTTGC TGATTTATTC CCGGGACATA
AGTGAACGCA AAGCGTTGGA GGAAAGAGTC CGGCAGCGTT TAAACCTGGA AGAAGCCATA
ACTACCGCCT CCCAGCTTTT CCTGGCAGCC GATAGTGTTG ATTTGGTAAA GATAATGGGT
ATTGTTGGTG AAGCTGTCAC AGCGGATCGA GTTTATATTT TCGAGTTCTT TGATGAAGGT
AAAAAAACCA GCAATACCTG CGAGTGGTGT GCAGTTGGTA TAGAATCCGC CCAGGAAATG
TTGCAGGACC TAGACAGCAG CCTTTTTCCC TGGTGGCTTG GAAGATTAAA AAATGGAGAA
AACATAGTTA TTCAAGATGT AAATGCCCTC CCGGCGGAAG CAAACAACGA AAAATTCCTG
TTACAATCCC AGGGAATCAA GTCACTGCTA GTGGTACCTA TTCGTTTAAA GAACTCGGAA
CTAGTTGGTT TTCTGGGCTT TGATGACAAC CAGTCCACCC GTAAGTGGCT AGCTGAGGAT
ATAAAAACCT TGCGCATGCT GGCAGAGATG ATTGCTCTCT ACTGGACTCG TTGCCAGGTG
AAGAATGCCC TACGGGAGTC CGAACAGCGC CTAGCCTCAA TTATTGATTT CCTGCCCGAT
GCTACTTTTG CTATAGATAA TCAGGGCCGG GTGATAATCT GGAATCGGGC TATGGAAGAG
ATGAGCGGAA TCAAAGGAGA AGATATGCTG GGAAAGGATA ATTATGAATA TGCCCTCCCG
TTTTTCTCTA AAAGGCACCC CATGCTTATT GACCTGGTAA TGAATCCAGA CCATCCCCTA
AAAGAGAAAT ATTTGTTTCT TAAAAAGCAT GATGAAACCC TGGTTGGAGA AATATACAGT
CCGCAATCCG GCTTGTATAT GTTCGGCACT GCTTCCCCGC TCTATGATGC CAATAATCGC
TGGGTGGGAG CTATTGAATC CATACGGGAT GTGACCGAAA GAAGAAGGGC CGAGGAAAAA
ATCCGTTACC TAAGTCACTT TGATAAGCTA ACCGGTCTTT ACAATCGCTC GTTCTTTGAA
GAAGAAGTCA AACGGCTGGA TAAAAAAGAA TACCTGCCCA TTAGTATTAT AATTGGTGAT
GTTAACGGCT TAAAGCTGGT AAATGACGCT TTTGGGCACC GGGAAGGTGA TCGCCTTCTG
CTTCGTGCCG CCCAAATCCT TAAAGATTCA TGTCGTCAGG AAGATATAAT TGCCCGCTGG
GGTGGCGATG AGTTTATTAT CCTTCTGCCC AATACTTATC ACCAGCAGGC TTTTCATATC
TGCCAACGTA TTAAAAATGC CTGCCAGCAA AGCGAGAGTG AACCCATACA GGTAAGTATA
GCCCTGGGTA CTGCCAGCAA AGAGACCGTT GATGAAAACA TATTCACTAT TATTAAAGAA
ACTGATGATC GCATGTATAG CAACAAAGTA CAGGAGAGCA AAAATACCCG CAACTCTTTC
ATTTTATCTC TAGAAAACAG TCTTCGTAAT CGCACCAGGA AAAGCCAGTT CTATATTGTA
CATAAACAAG AAACCGCTAA ACAATTGGGC CTGTTACTCG GGCTATCCAA AAATGAGCTG
CAAAACCTAC TTCTTTTAGC CTCTCTTCAC GATATCGGTA TCATAACCAT ACCCCCGGAA
ATACTGTTTA AAGCAGCAGC GTTAACCCCG GGAGAGTGGG AGATCATAAA AAAACACCCG
GAAACGGGTT ATCGTATTGC CCAATCAACC CCAGAATTGC TAGTCATAGC TGAAGCTATA
CTCGCTCATC ACGAACGCTG GGATGGCAGT GGCTATCCCC AAGGAATTGC CGGGCAGGAG
ATTCCCCTGG GAGCACGAAT ACTGGCTATT ATAGACTCCT ATAATGCCAT GATAAGCGGG
CGTCCTTACA AGGCAGCAAT CAGTCCCAGC CAGGCCTTAC AGGAAATACA TAGATGTGCC
GGCAGCCAGT TTGACCCCGA TTTGGTTCGA CTCTTCCTGG AAATAAAGAA GGGAATAAGC
AGGAGACAGT AA
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| Protein sequence | MPKNDITDNF LGNFLELFRL SEEDLPLSEQ KYRTIVENAN DIISVHRASD LSYLYINSTG
PKILGWSKKE LIRKSPVNLI HPEDLTRALE KIKTAGIEDG CTCEYRFLKK DSQYLWLESN
GKKIRFNAET VALLIYSRDI SERKALEERV RQRLNLEEAI TTASQLFLAA DSVDLVKIMG
IVGEAVTADR VYIFEFFDEG KKTSNTCEWC AVGIESAQEM LQDLDSSLFP WWLGRLKNGE
NIVIQDVNAL PAEANNEKFL LQSQGIKSLL VVPIRLKNSE LVGFLGFDDN QSTRKWLAED
IKTLRMLAEM IALYWTRCQV KNALRESEQR LASIIDFLPD ATFAIDNQGR VIIWNRAMEE
MSGIKGEDML GKDNYEYALP FFSKRHPMLI DLVMNPDHPL KEKYLFLKKH DETLVGEIYS
PQSGLYMFGT ASPLYDANNR WVGAIESIRD VTERRRAEEK IRYLSHFDKL TGLYNRSFFE
EEVKRLDKKE YLPISIIIGD VNGLKLVNDA FGHREGDRLL LRAAQILKDS CRQEDIIARW
GGDEFIILLP NTYHQQAFHI CQRIKNACQQ SESEPIQVSI ALGTASKETV DENIFTIIKE
TDDRMYSNKV QESKNTRNSF ILSLENSLRN RTRKSQFYIV HKQETAKQLG LLLGLSKNEL
QNLLLLASLH DIGIITIPPE ILFKAAALTP GEWEIIKKHP ETGYRIAQST PELLVIAEAI
LAHHERWDGS GYPQGIAGQE IPLGARILAI IDSYNAMISG RPYKAAISPS QALQEIHRCA
GSQFDPDLVR LFLEIKKGIS RRQ
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