Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1465 |
Symbol | |
ID | 4282330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1677670 |
End bp | 1679982 |
Gene Length | 2313 bp |
Protein Length | 770 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638138343 |
Product | hypothetical protein |
Protein accession | YP_754141 |
Protein GI | 114566987 |
COG category | [R] General function prediction only |
COG ID | [COG3378] Predicted ATPase |
TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.237309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAGTTC AATTTGAAAA AATACCGCAG TACTTAAAGG ACAACGGCCA GTTCTGCAAC TGGAGATACG AACTGCGGGA CGGCAGCCAA ACCAAGGTGC CGTATATGTC CGGCACAAAA CGCAAAGCCA ATGTGGATGA CCCGACCACA TTCGTAGCCT TTGATACTGC GGCATCCGCA ACAGGCTATG ACGGCATCGG CATCCGCGTC TGTGGCAGGA TCGTGGGCAT CGACCTCGAC CATTGCATGG AGGAAGGCAA GCTGCTCCCG TGGGCGCAGG AAATCGTAGA CCGCTTCAAT GTGACCTACA TTGAAATCAG TCCCTCTGGC GAAGGCATTC GCATCTTCGC TTTGCTACCG GACAGCTTTG AGTACGATAC CCAGACCTAC TACATCAAGA AGGGCAACAT CGAGGTCTAC ATCCCCGGCC ACACCAACAG ATTCCTCACC GTGACCGGGA ACACCATCAA CGGCGCAGAT GTAGCAGAAA CGGCAGAGGC GCTCACATGG CTGCTCGATA CCTATATGCA ACGCCCTACA CCGCCCACAC CCGCCGTGGC TGCTCCCGGC GAAAGCTACC TCAGTGATGA TGAAGTCATC GTTAAGGCGG CATCCTCCAA AAACGGAGAG AAGTTCACCC GCCTGTGGAA TGGAGATATC ACCGGGTACA AGAGCCAAAG CGAAGCGGAT GCCGCACTGG TTTCCATTCT GGCATTCTGG TGCAGCGGTG ATAAGGCGCA GATGGACAGG CTGTTCCGTC AGTCCTGCTT GATGCGTGAA AAATGGGATA GCCTCCGTGG GGTCGACAGC TACGGAAACA CCGTCATCAA TAAGATGGTG TCCCGTATGA CCGACTACTA CAAGCCTATC ATCCCACGCT CCGCCGCCGA GGACTTCGGT GTGGAGTGGC TGAAGGAACT TGACCCAATG GACTCCTCCA AGTACCCGTG GAACGACATT GGCGCCGGAC ACATCTTCGC AGACTTCTTC CAAGACCGAC TGCGTTATGT GCCGGAGCGG AAGATGTGGT TTCACTATGC GAACGGAGTG TGGCAGCCGG ATACGGGCAA CCTCTGTGCC ATGAAATATT GCATGGATCT TGCCAACCTC ATGTACACCT TCGCCCTTGA AATCAAGGAT GAGGATAAGC GCAAGTCCTA CATGAAATAC GCCAGCCGTT GGCAGAGCCA CTCCAACCGG GTCAATATCC TCAAGGACGC ACAGGTGCAT CATCCCATAT CCTACGGCAG CTTTGATGCA GATATCTACA TCTTCAACTG CAAGAACGGC ACCCTTCATA TCGACACCGG AGAGTTTACC GAACATCGTA GCACCGACCT TCTCACGAAG AAAAGTCCTG TGGTATATGA CCCAATGGCC TATTCCGGGC GCTTTGCCAG CTACATTGAC GAAATCATGA GCGGTGATGC CGACAGAGCC AAGTTCCTGC AGAAAATCCT CGGTTACGGC CTTACCGGGG ACACCCGCCA TGAATGCATG ACCATCCTCT ACGGAGTCAC CACACGCAAC GGCAAAGGCA CTCTGTGCGA GAGCGTACTG AAGGTGCTTG GGGATTATGG CTGCGCTTCC CGCCCGGAAA CCATCGCTAT GAAAAGCTAC ACCAACGGCT CACAGCCGAG CGAGGATGTG GCCCGGCTTG CAGGTGTTCG CTTTGTAAAT ATCCCGGAGC CGGGAAAAGG CATGGTGCTT GATGCCGCCA AGGTCAAAGC CATGACGGGC AATGATACCC TCAATGCCCG CTACCTCCAT GAGAACAGCT TTGACTTTCA GCCGCAGTTC AAAATCTATG TCAACGCCAA CTTCCTCCCG GTCATCAACG ATATGACCCT GTTCTCCAGT GACCGAATTA TCATTATACC CTTCGACAGG CATTTTGATG AACACTCCCG TGACACCACG CTGAAGCGCC GTTTTGCCGA GGAAGATGTC CAGAGCGCCA TCCTCAACTG GCTGCTTGAG GGATACCGAC TGCTGCAGAC CGAGGGACTG TTCCTTCCGA AATCCGTGAA AGATGCCACA GAACGCTATC AGCACGATAG TGACAAGATG GCGCTGTTCT TTGAGGACAG CCTTGTGGCG GACGATACCG CCGAGGTCAT GACTGCACGG GTCTATGCCC GGTATAAGGA ATGGTGCCAA GAGAACGGCA CCTACCCAGA GGGAATGAAA AACTTTAAAC AGGGTCTACA GGCTTTTGCC GAGGTAGTCC GCAAGCGCCC CAAGAGGGGT GGAGAAAAAA CCACACTGCT CATCGGCTAT CGGCTCATCA CCGACATCCC GCCGCTGACA TAA
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Protein sequence | MQVQFEKIPQ YLKDNGQFCN WRYELRDGSQ TKVPYMSGTK RKANVDDPTT FVAFDTAASA TGYDGIGIRV CGRIVGIDLD HCMEEGKLLP WAQEIVDRFN VTYIEISPSG EGIRIFALLP DSFEYDTQTY YIKKGNIEVY IPGHTNRFLT VTGNTINGAD VAETAEALTW LLDTYMQRPT PPTPAVAAPG ESYLSDDEVI VKAASSKNGE KFTRLWNGDI TGYKSQSEAD AALVSILAFW CSGDKAQMDR LFRQSCLMRE KWDSLRGVDS YGNTVINKMV SRMTDYYKPI IPRSAAEDFG VEWLKELDPM DSSKYPWNDI GAGHIFADFF QDRLRYVPER KMWFHYANGV WQPDTGNLCA MKYCMDLANL MYTFALEIKD EDKRKSYMKY ASRWQSHSNR VNILKDAQVH HPISYGSFDA DIYIFNCKNG TLHIDTGEFT EHRSTDLLTK KSPVVYDPMA YSGRFASYID EIMSGDADRA KFLQKILGYG LTGDTRHECM TILYGVTTRN GKGTLCESVL KVLGDYGCAS RPETIAMKSY TNGSQPSEDV ARLAGVRFVN IPEPGKGMVL DAAKVKAMTG NDTLNARYLH ENSFDFQPQF KIYVNANFLP VINDMTLFSS DRIIIIPFDR HFDEHSRDTT LKRRFAEEDV QSAILNWLLE GYRLLQTEGL FLPKSVKDAT ERYQHDSDKM ALFFEDSLVA DDTAEVMTAR VYARYKEWCQ ENGTYPEGMK NFKQGLQAFA EVVRKRPKRG GEKTTLLIGY RLITDIPPLT
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