Gene Swol_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1465 
Symbol 
ID4282330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1677670 
End bp1679982 
Gene Length2313 bp 
Protein Length770 aa 
Translation table11 
GC content54% 
IMG OID638138343 
Producthypothetical protein 
Protein accessionYP_754141 
Protein GI114566987 
COG category[R] General function prediction only 
COG ID[COG3378] Predicted ATPase 
TIGRFAM ID[TIGR01613] phage/plasmid primase, P4 family, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.237309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAGTTC AATTTGAAAA AATACCGCAG TACTTAAAGG ACAACGGCCA GTTCTGCAAC 
TGGAGATACG AACTGCGGGA CGGCAGCCAA ACCAAGGTGC CGTATATGTC CGGCACAAAA
CGCAAAGCCA ATGTGGATGA CCCGACCACA TTCGTAGCCT TTGATACTGC GGCATCCGCA
ACAGGCTATG ACGGCATCGG CATCCGCGTC TGTGGCAGGA TCGTGGGCAT CGACCTCGAC
CATTGCATGG AGGAAGGCAA GCTGCTCCCG TGGGCGCAGG AAATCGTAGA CCGCTTCAAT
GTGACCTACA TTGAAATCAG TCCCTCTGGC GAAGGCATTC GCATCTTCGC TTTGCTACCG
GACAGCTTTG AGTACGATAC CCAGACCTAC TACATCAAGA AGGGCAACAT CGAGGTCTAC
ATCCCCGGCC ACACCAACAG ATTCCTCACC GTGACCGGGA ACACCATCAA CGGCGCAGAT
GTAGCAGAAA CGGCAGAGGC GCTCACATGG CTGCTCGATA CCTATATGCA ACGCCCTACA
CCGCCCACAC CCGCCGTGGC TGCTCCCGGC GAAAGCTACC TCAGTGATGA TGAAGTCATC
GTTAAGGCGG CATCCTCCAA AAACGGAGAG AAGTTCACCC GCCTGTGGAA TGGAGATATC
ACCGGGTACA AGAGCCAAAG CGAAGCGGAT GCCGCACTGG TTTCCATTCT GGCATTCTGG
TGCAGCGGTG ATAAGGCGCA GATGGACAGG CTGTTCCGTC AGTCCTGCTT GATGCGTGAA
AAATGGGATA GCCTCCGTGG GGTCGACAGC TACGGAAACA CCGTCATCAA TAAGATGGTG
TCCCGTATGA CCGACTACTA CAAGCCTATC ATCCCACGCT CCGCCGCCGA GGACTTCGGT
GTGGAGTGGC TGAAGGAACT TGACCCAATG GACTCCTCCA AGTACCCGTG GAACGACATT
GGCGCCGGAC ACATCTTCGC AGACTTCTTC CAAGACCGAC TGCGTTATGT GCCGGAGCGG
AAGATGTGGT TTCACTATGC GAACGGAGTG TGGCAGCCGG ATACGGGCAA CCTCTGTGCC
ATGAAATATT GCATGGATCT TGCCAACCTC ATGTACACCT TCGCCCTTGA AATCAAGGAT
GAGGATAAGC GCAAGTCCTA CATGAAATAC GCCAGCCGTT GGCAGAGCCA CTCCAACCGG
GTCAATATCC TCAAGGACGC ACAGGTGCAT CATCCCATAT CCTACGGCAG CTTTGATGCA
GATATCTACA TCTTCAACTG CAAGAACGGC ACCCTTCATA TCGACACCGG AGAGTTTACC
GAACATCGTA GCACCGACCT TCTCACGAAG AAAAGTCCTG TGGTATATGA CCCAATGGCC
TATTCCGGGC GCTTTGCCAG CTACATTGAC GAAATCATGA GCGGTGATGC CGACAGAGCC
AAGTTCCTGC AGAAAATCCT CGGTTACGGC CTTACCGGGG ACACCCGCCA TGAATGCATG
ACCATCCTCT ACGGAGTCAC CACACGCAAC GGCAAAGGCA CTCTGTGCGA GAGCGTACTG
AAGGTGCTTG GGGATTATGG CTGCGCTTCC CGCCCGGAAA CCATCGCTAT GAAAAGCTAC
ACCAACGGCT CACAGCCGAG CGAGGATGTG GCCCGGCTTG CAGGTGTTCG CTTTGTAAAT
ATCCCGGAGC CGGGAAAAGG CATGGTGCTT GATGCCGCCA AGGTCAAAGC CATGACGGGC
AATGATACCC TCAATGCCCG CTACCTCCAT GAGAACAGCT TTGACTTTCA GCCGCAGTTC
AAAATCTATG TCAACGCCAA CTTCCTCCCG GTCATCAACG ATATGACCCT GTTCTCCAGT
GACCGAATTA TCATTATACC CTTCGACAGG CATTTTGATG AACACTCCCG TGACACCACG
CTGAAGCGCC GTTTTGCCGA GGAAGATGTC CAGAGCGCCA TCCTCAACTG GCTGCTTGAG
GGATACCGAC TGCTGCAGAC CGAGGGACTG TTCCTTCCGA AATCCGTGAA AGATGCCACA
GAACGCTATC AGCACGATAG TGACAAGATG GCGCTGTTCT TTGAGGACAG CCTTGTGGCG
GACGATACCG CCGAGGTCAT GACTGCACGG GTCTATGCCC GGTATAAGGA ATGGTGCCAA
GAGAACGGCA CCTACCCAGA GGGAATGAAA AACTTTAAAC AGGGTCTACA GGCTTTTGCC
GAGGTAGTCC GCAAGCGCCC CAAGAGGGGT GGAGAAAAAA CCACACTGCT CATCGGCTAT
CGGCTCATCA CCGACATCCC GCCGCTGACA TAA
 
Protein sequence
MQVQFEKIPQ YLKDNGQFCN WRYELRDGSQ TKVPYMSGTK RKANVDDPTT FVAFDTAASA 
TGYDGIGIRV CGRIVGIDLD HCMEEGKLLP WAQEIVDRFN VTYIEISPSG EGIRIFALLP
DSFEYDTQTY YIKKGNIEVY IPGHTNRFLT VTGNTINGAD VAETAEALTW LLDTYMQRPT
PPTPAVAAPG ESYLSDDEVI VKAASSKNGE KFTRLWNGDI TGYKSQSEAD AALVSILAFW
CSGDKAQMDR LFRQSCLMRE KWDSLRGVDS YGNTVINKMV SRMTDYYKPI IPRSAAEDFG
VEWLKELDPM DSSKYPWNDI GAGHIFADFF QDRLRYVPER KMWFHYANGV WQPDTGNLCA
MKYCMDLANL MYTFALEIKD EDKRKSYMKY ASRWQSHSNR VNILKDAQVH HPISYGSFDA
DIYIFNCKNG TLHIDTGEFT EHRSTDLLTK KSPVVYDPMA YSGRFASYID EIMSGDADRA
KFLQKILGYG LTGDTRHECM TILYGVTTRN GKGTLCESVL KVLGDYGCAS RPETIAMKSY
TNGSQPSEDV ARLAGVRFVN IPEPGKGMVL DAAKVKAMTG NDTLNARYLH ENSFDFQPQF
KIYVNANFLP VINDMTLFSS DRIIIIPFDR HFDEHSRDTT LKRRFAEEDV QSAILNWLLE
GYRLLQTEGL FLPKSVKDAT ERYQHDSDKM ALFFEDSLVA DDTAEVMTAR VYARYKEWCQ
ENGTYPEGMK NFKQGLQAFA EVVRKRPKRG GEKTTLLIGY RLITDIPPLT