| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1442 |
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| Symbol | |
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| ID | 4282746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1650482 |
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| End bp | 1653001 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638138322 |
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| Product | 5-methyltetrahydrofolate-homocysteine methyltransferase, truncation |
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| Protein accession | YP_754120 |
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| Protein GI | 114566966 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase
[TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.955782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCCGA ACTTGTATAC TCTTTTGCAG AGTAGAATTC TTATCCTGGA TGGAGCCATG
GGAACCATGC TGCAGGAAAG GGGAATGGTC CCGGGGGAGT GTCCGGAGCT TTTTGGGGTA
AATAATCCAT TGATTTTGGA AGATATTCAC TATCAGTATA TGGAAGCGGG AGCCGATATT
ATCCAATCCA ACACCTTTGG CGGCAATCGC TTTAAACTGG CTGAATATGG CCTGCAGGAT
CGGGTAGCGG AAATAAACGC TGAAGCCATA AGAATTGCTC GCGCCGGAGC CAGGGGAAAA
GCCCTGGTAG CGGCCTCCAT CGGTCCCAGC GGCAAACTGT TGCAACCCTT TGGAAATGCG
GATTTTGCTG AGCTCTATGC GGCTTTTACC GAGCAGATGC TCAGCTGTGA AAAAGCCGGG
GCTGATCTCA TATCAATAGA AACCATGACT GACATTGGGG AAATGAGGGC CGCCTTGATT
GCGGCCTGCT CCAATACCCG CCTGCCGGTT ATTGCCCATA TGACTTTTGA GCCCGGGGGA
AGAACCCTGA TGGGTACTGA TCCCCTTACC GCTCTTATTA TTATGGAGGC TTTGCAGCCC
CTGGCCATTG GAGCCAATTG TTCCGGGGGT GCCCGGGAAT TGCTGCCCAT AATCGAAGAA
ATGGGCCGCT ATAGCAGTGT ATTTCTATCA GTAGAGCCCA ATGCCGGTTT ACCCCAACTG
CTCGGGGAAA GAACCGTCTT CCCGGATAGA CCGGAGGAAA TGGCCGAATA TGCCTTGAAA
TTGAGGGATG TCGGGGCCAA TATCATAGGC GGCTGCTGCG GTACCACCCC GGAGCATATA
AAAGCTATCG CCAGTACTTT AAGGGGACTT TCCCCCCGGA AAAGGACACC CCGAAGAATT
AGGGCCCTAG CTTCGCGTAG TCAGGCAGTG GTTCTGGGAG AGGGAAAGCC GCTCACTTTT
ATCGGAGAAA GGATAAACCC TACCGCCCGC AAGAAATTGG CTCAGGATAT CAAGGAAGGC
CGTATGCAGA TGGTAGTGGA TGAAGCCAGG AAACAGGTGG AAGCAGGTGC CGCCATTCTG
GATGTAAATA TGGGAGTACC TGGAATAGAT GAAGCTATGG CTATGAGAGA GGCGGTGGTT
GCAGTTCAGG CTGCGGTTGA TGTCCCTCTT GCTTTGGATT CCACCAGCGC CCAGGCTATT
GAAGAGGGTT TGCAATCCTT TGTGGGCCGG CCTTTGATTA ATTCCACCAC CGGAGAAGAT
AAACAATTAG AGATCATACT TCCCCTGGCC AAAAAATATG GGGCCGCTGT ACTGGGACTC
TGCCTGGATC AAAATGGAAT CCCGGAGCGG GCCGAGGACA GGGTAGAGAT AGCCCGGAAG
ATCTTTGAGC AGGCGCGGGA ATATGGTTTA CGGGAAGAAG ATATTTATAT AGATTGCCTG
GTAAAAACTG CCAGTGCCGA ACAATCCCAG GTTTTTGAAA CCCTGAAGGC TTTGCGGATG
GTTAAGGAGG AAATGGCTTT AGGTACGGTG CTGGGAGTTA GTAATGTATC TCATGGTCTG
CCCGCCCGCG AGCTTTTGAA TTCCACTTAT CTAGCCATGG CCTGGGCGGC CGGACTGGAT
TTACCCATAA TGAATCCTTT TGAAAGCAGA ATGATGGATG CTAATAGAGC CGCTGCCGTT
TTACTTAATC GTGATCTTAA TTCGCTAGAA TTTATTGAGA AATATAAAGA CTATAAAGCA
GATAAAGCCC AGGACTCCGC CAGAATCGTC AGACCGAATT ACTGTATTTG CCAACAATGC
AATATTCCAG AATTGCTGGA AAATTCAGAA AAGATACCGT TGGGTGTGGG TAATAAAGCC
GAGGAAAAGA ACATGAAGAA CCCGCTGTCC ACCCTGGAGA TAATTAGCCA GGCAGTCCTT
CAAGGGGATA AGGGACTGCT TTTGGAACAG GTGCAAAAGG CCCTGGATCA GGAAAAAATA
GCCCCGATGG AAATAGTTAA TAAGGCGCTT ATTCCAGGAA TCGAAAGGGC GGGAGAACTC
TATGACCAAA AAAAATATTT CCTACCCCAG TTGATGTTGG CAGCCGAAAG TATGAAAGAT
GCCTTTACGC TGGTAAAAAC CCGTCTGAGC GGTGAAGCGG AAGAACATAA AGGGCTTATC
GTTCTAGCCA CGGTGGAAGG CGATATCCAT GACATTGGCA AGAATATTGT AGCCATTTTA
CTGGAGAATT ATGGTTTCAA GGTATTGGAT ATGGGAAAAG ATGTCAAGGC GGAAGTTATA
TTGGATGTGG CCGAAAAGGA GAAAGCAGAT ATTATTGGCT TAAGCGCCTT GATGACAACA
ACCATGCCAC GAATGCAGGA GGTGATCCAG GGCGTAAAAG CCCGTGGAAT GCCGTGCAAA
ATAATGGTTG GAGGAGCCGT CTTGAATCAG GAATATGCAG ATCATATCGG GGCCGATGCT
TATTCTGAAG ATGCGCGCCA GGCAGTTTTA ATGGCCCAAA GGCTTTTAGG GGGGAGATAA
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| Protein sequence | MSPNLYTLLQ SRILILDGAM GTMLQERGMV PGECPELFGV NNPLILEDIH YQYMEAGADI
IQSNTFGGNR FKLAEYGLQD RVAEINAEAI RIARAGARGK ALVAASIGPS GKLLQPFGNA
DFAELYAAFT EQMLSCEKAG ADLISIETMT DIGEMRAALI AACSNTRLPV IAHMTFEPGG
RTLMGTDPLT ALIIMEALQP LAIGANCSGG ARELLPIIEE MGRYSSVFLS VEPNAGLPQL
LGERTVFPDR PEEMAEYALK LRDVGANIIG GCCGTTPEHI KAIASTLRGL SPRKRTPRRI
RALASRSQAV VLGEGKPLTF IGERINPTAR KKLAQDIKEG RMQMVVDEAR KQVEAGAAIL
DVNMGVPGID EAMAMREAVV AVQAAVDVPL ALDSTSAQAI EEGLQSFVGR PLINSTTGED
KQLEIILPLA KKYGAAVLGL CLDQNGIPER AEDRVEIARK IFEQAREYGL REEDIYIDCL
VKTASAEQSQ VFETLKALRM VKEEMALGTV LGVSNVSHGL PARELLNSTY LAMAWAAGLD
LPIMNPFESR MMDANRAAAV LLNRDLNSLE FIEKYKDYKA DKAQDSARIV RPNYCICQQC
NIPELLENSE KIPLGVGNKA EEKNMKNPLS TLEIISQAVL QGDKGLLLEQ VQKALDQEKI
APMEIVNKAL IPGIERAGEL YDQKKYFLPQ LMLAAESMKD AFTLVKTRLS GEAEEHKGLI
VLATVEGDIH DIGKNIVAIL LENYGFKVLD MGKDVKAEVI LDVAEKEKAD IIGLSALMTT
TMPRMQEVIQ GVKARGMPCK IMVGGAVLNQ EYADHIGADA YSEDARQAVL MAQRLLGGR
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