| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1428 |
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| Symbol | |
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| ID | 4282919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1638101 |
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| End bp | 1639210 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638138308 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_754106 |
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| Protein GI | 114566952 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00175971 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAAAAT TTGAACTGCT ACAAGAGGAT AAGACATCTG CGGCCCGACT GGGCCGCTTA
ACCACTGCTC ATACTACTGT GGATACCCCG ATATTTATGC CGGTAGGTAC TCAGGCAACG
GTCAAAACCC TCACCCCCGA GGATCTATAT GAAATCGGAG CCGGTATTAT TTTGGCCAAT
GCCTATCATC TGTACCTGCG TCCCGGTTGT GAACTGATAC AACAGGCCGG CGGCCTGCAT
CGCTTCATGA ACTGGAAGAA AGGTATTTTG ACCGACAGTG GGGGATTTCA AGTCTTTAGC
CTGAGCAAAT TGCGTGATAT TAACGATGAT GGAGTCTGGT TTCATTCCCA TATCGATGGT
TCGCGCCATT TCCTCACTCC CGAAAAGGTA ATGGAGATTG AAGCAAAGCT CGGGGCGGAT
ATAGCCATGT GCTTTGATGA GTGTGCTCCT TACCCTTGCA CTTATGAGGA AGCGGAAAAG
GCGGTAAAGA GAACCAGTCT CTGGGCCGGG AGGTGTAAAA AGGCTCATAA TAATGATAAG
CAGGTGTTAT TTGGGATTAT TCAAGGCAGT GTTTATCCCG AATTAAGGGA AAGGAGTGTG
GGAGAGCTGA CTGCTCTGGA TTTCCCCGGC TATGCAATAG GCGGTTTGAG TGTCGGCGAA
CCCAAGGAAA TGCTCTATGC TACCCTTGAA GTTACCACTC GTATGTTGCC CCGGGAAAAG
CCCCGTTACC TTATGGGAGT GGGTGCTCCT GAGGATTTGC TGGAAGGGGT CAGGCTAGGA
GTGGATATGT TTGATTGTGT TTTACCAACC CGGCTGGCCC GGCATGGAAC AGCCTATACT
GCTGAGGGTA AGATAACGGT GCGCAACGCT CTTTATGCGG CGGATTTCTC TCCCCTTGAT
GCAAGGTGTA GTTGTTATGT ATGCCAGAAT TATAGCCGGG CTTATATCAG GCATTTAATT
AAGGCTGAGG AGATACTAGC TCAGCGTTTG CTGAGCTATC ACAACCTTTA TTTCCTGTTC
CAACTAATGG CTGGTATTAG AGCGGCCTTA GCAAAAGGAG AATTTCCCAG CTTTTACCGG
GAATTTTTCC ATAATTATAT CAGCGCTTAG
|
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| Protein sequence | MLKFELLQED KTSAARLGRL TTAHTTVDTP IFMPVGTQAT VKTLTPEDLY EIGAGIILAN
AYHLYLRPGC ELIQQAGGLH RFMNWKKGIL TDSGGFQVFS LSKLRDINDD GVWFHSHIDG
SRHFLTPEKV MEIEAKLGAD IAMCFDECAP YPCTYEEAEK AVKRTSLWAG RCKKAHNNDK
QVLFGIIQGS VYPELRERSV GELTALDFPG YAIGGLSVGE PKEMLYATLE VTTRMLPREK
PRYLMGVGAP EDLLEGVRLG VDMFDCVLPT RLARHGTAYT AEGKITVRNA LYAADFSPLD
ARCSCYVCQN YSRAYIRHLI KAEEILAQRL LSYHNLYFLF QLMAGIRAAL AKGEFPSFYR
EFFHNYISA
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