| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1422 |
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| Symbol | |
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| ID | 4282726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1633126 |
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| End bp | 1634451 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638138302 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_754100 |
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| Protein GI | 114566946 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000179827 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAGGAGT TGTATTTGAC GGGAACCATG AAGATAAATA GCCAGGGTAA TTTGGAAATC
GGCGGGATGG ATACAGTGGA TCTTGCCCGT AAATTTGGCA CCCCCCTGTG GATCATAGAT
GAGGAGGGAT TCCGGCGAAA TTGCCGGAAT ATAAAGAAAG CTTTCTCGCT CTATGGTGAT
TCCCAGGTGC TATATGCCAG TAAGACCCTT GCTACCATGG CTATTTATAG GATAGTAGAG
CAAGAGGGCC TGGGCTTGGA TGTGGTTTCC GGAGGTGAAC TATATACGGC ATTAAAAGCC
GGCTTTCCCA TGCAAAAAGT TTATTTCCAT GGTAACAACA AGAGCCGGGA AGAATTGCGA
ATGGCTATCT GTGCCGGGGT AGCCCGGATA GTAGTAGATA ATTTTTATGA ATTGGAACTT
TTAAACCAGC TTTGTACTGA GGAGAACTGT CAACAGGAGA TACTCTTGCG GGTTACTCCC
GGAGTTGAGG CCCATACCCA TGAATATATT CAAACCGGGC AGATTGACTC CAAGTTTGGT
TTTACTCTTA GTGATGGGCA GGCCATGGAA GGGGTCAAAA AGGCCTTATC CATGCCTGGA
ATTAAGCTAG TGGGCCTGCA TTGTCATATT GGTTCTCAAA TATTTGCCAT GCAATCCTTT
CAATATACCA GTTCCATAAT GATGGATTTT TGGGCGGAAA TAAAGAGAAC AAGTGGATGC
CAGTTGGAGG AACTGAATTT GGGAGGGGGT CTGGGTATTT ACTATGTTGC TGGAGATGAA
CCCCGTAAGG CGGAAGAATG GGCTAAGGCG GTTATGCCGG TAGTTCAGGA AAAAGCCCGG
CAGCATGGAC TAAAAGTACC TCGTATTATT GTTGAACCCG GGAGGGCTAT TGCTGGCCCG
GCTGGATTGA CCCTGTATAC GCTCGGTTCA AGCAAAGAAG TTAAGGGGAT ACGCAAATAT
GTGGCCGTAG ATGGGGGGAT GACCGATAAT CCCCGTCCGG CTCTTTATGC AGCCAAATAC
CAGGCCCTAC TGGCCAATAA AGCGGAAGAA AAACCTGTAG AAACAGTATC AATTGCTGGT
AAATGCTGTG AATCCGGGGA TATGTTAATT TGGGATTTAG AGCTACCCTG GGTGGAGGCA
GGAGATATCC TGGCGGTTCT AGCTACTGGT GCCTACAACT ATAGCATGTC CAGCAACTAT
AATCGCCTGC CCCGGCCAGC TATGGTTCTG GTCAAGCAAG GTCAGGCGGA TTTGATAATT
AAACGAGAGA ACTATGAGGA TTTATTGCGT AACGACCTTA TCCCGGAAAG GTTGGAGCGG
GATTAG
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| Protein sequence | MKELYLTGTM KINSQGNLEI GGMDTVDLAR KFGTPLWIID EEGFRRNCRN IKKAFSLYGD
SQVLYASKTL ATMAIYRIVE QEGLGLDVVS GGELYTALKA GFPMQKVYFH GNNKSREELR
MAICAGVARI VVDNFYELEL LNQLCTEENC QQEILLRVTP GVEAHTHEYI QTGQIDSKFG
FTLSDGQAME GVKKALSMPG IKLVGLHCHI GSQIFAMQSF QYTSSIMMDF WAEIKRTSGC
QLEELNLGGG LGIYYVAGDE PRKAEEWAKA VMPVVQEKAR QHGLKVPRII VEPGRAIAGP
AGLTLYTLGS SKEVKGIRKY VAVDGGMTDN PRPALYAAKY QALLANKAEE KPVETVSIAG
KCCESGDMLI WDLELPWVEA GDILAVLATG AYNYSMSSNY NRLPRPAMVL VKQGQADLII
KRENYEDLLR NDLIPERLER D
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