Gene Swol_1419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1419 
Symbol 
ID4282723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp1629058 
End bp1629681 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content43% 
IMG OID638138299 
Productpeptidase M50 
Protein accessionYP_754097 
Protein GI114566943 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0643259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCAGT CGCTGAGTGA AATGTTAATA GCATTACCAG CTATAATGAT TGCCTTGACC 
TTCCATGAGT ATGCTCATGG CAAGGTAGCT GATATTTTGG GTGATAGCAC CCCCTATTAC 
CAGGGGAGAC TGACCCTTAA TCCTTTGCCA CATATTGATT GGGTAGGATT TTTTATGCTT 
ATCTTATTTC ATTTTGGCTG GGCCAAACCG GTACAGGTAA ACCCTTATAA TTTTAAGAAT 
GTAAGCCCCA AACAAGGTAT GATGCTGGTT TCGCTGGCGG GACCGGGCAT GAATATTCTC 
TTAGCTTTTC TGGGCATGCT GGCTTACAAG TACCTGCTTC CGTTTCAAGG ACAGGAATGG 
GCTATAATGA CCATAAACAT GATTCACCCT TTGATATATA TTAACTTGAT TCTGGCGGCT 
TTTAACTTGA TACCCTTACC GCCTCTGGAT GGCTCCAAAA TAGTAGCTGG CTTACTGCCG 
GATTCTGGGG CGGAAATGTT TTATTCCCTG GAGCCTTATG GGCCATTGAT ACTCTTGTTG 
CTTATCATAA CTGGAGCTGC AGCTTATATT TTCTTGCCAC TGGCCGGTTT CTTGAATACG 
CTTTTATATG CCATTGTGTT CTAA
 
Protein sequence
MIQSLSEMLI ALPAIMIALT FHEYAHGKVA DILGDSTPYY QGRLTLNPLP HIDWVGFFML 
ILFHFGWAKP VQVNPYNFKN VSPKQGMMLV SLAGPGMNIL LAFLGMLAYK YLLPFQGQEW 
AIMTINMIHP LIYINLILAA FNLIPLPPLD GSKIVAGLLP DSGAEMFYSL EPYGPLILLL 
LIITGAAAYI FLPLAGFLNT LLYAIVF