Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1409 |
Symbol | |
ID | 4282713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1622250 |
End bp | 1623917 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638138289 |
Product | formate--tetrahydrofolate ligase |
Protein accession | YP_754087 |
Protein GI | 114566933 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2759] Formyltetrahydrofolate synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000797787 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTG ATGTGGAAAT AGCCCAAAGC GCAAAAATGC AGCCTATTAC GGAGATTGCT GACAGGATTG GTATCGAGCC AAACGAACTG GAACTTTACG GGTCCTATAA GGCCAAAATT TCTCTTGATA TTATGAAGAG AATAGAAGAC AAGCCGCAAG GGAAACTGGT ACTGGTTACC GCTATTAGCC CTACCCCGGC AGGGGAAGGC AAGACAACAA CTACTATTGG CTTGGGACAG GCTCTCAATA AAATTGGGAA GAAAGCTATT GTAGCCCTGC GCGAGCCCTC TTTGGGTCCC GTTTTCGGAA TCAAGGGCGG TGCTACCGGG GGTGGTTATG CCCAAGTGGT ACCTATGGAA GATATCAATC TTCACTTTAC GGGGGATATC CATGCTGTGA CTACAGCCCA CAATCTGCTG GCAGCCCTGA TGGACAACCA CTTGCACCAG GGTAATGAGT TGGATATTGA TTCTCGCCAA ATCGTCTGGC GCCGGGTAAT GGATTTGAAT GAAAGGGTTC TCAGAAATAT TGTGCTGGGC CTGGGGGGGA GAATCAATGG GGTTCCACGG GAATCAGGTT TCGACATCTC GGTGGCTTCC GAAGTTATGG CCGCCCTCTG CCTGGCTACC GATTTAATGG ATTTGAAAGA ACGCTTTGCC AAAATTGTTG TGGCCTATAG TCAGCAGGGG CAAGCTATCA CGGCTGGCGA TCTGAAAGCA GCAGGTTCCA TGGCTCTTTT AATGAAAGAC GCTATCAAGC CTAACCTGGT ACAAACGCTG GAAAACACCC CGGCTTTTAT TCACGGGGGG CCTTTTGCCA ATATCGCCCA TGGAGCCAAC AGTATAGTGG CTACCCGCCT GGGGGTTAAA TTGGCTGATT ATATGGTGAC TGAGGCCGGC TTCGGTGCTG ACCTGGGAGC TGAAAAATTC TTTAATATTG TATGCCGTTA TGGCAAGCTG GTACCTGATG CTGTGGTACT GGTTGCCAGT ATTAGAGCAT TAAAACATCA TGGGGGAGTA AAAAAAGATA AACTGGGCGA AGAAAACCTG GAAGCACTGG CCCAGGGTAT GGAAAACTTG AAAAAACACC TGGAGAACAT CCAAAAATTT GGCGTTCCTG CAGTTGTGGC CCTGAACGAA TTTCCCAGCG ATACCAGTAA AGAAATTGAC TATGTATTCT CGCAGTGTGC GGCTATGCAA ACCGCAGTTT CTATTTCCCG GGTATGGGCC CAGGGAGGAG AAGGCGGCAT TGACCTGGCT GAAAAATTGG TATTGGCTAC CGAACAGGGG AGTCAATTCA AGTTCCTTTA CGAATTAAAC CAGCCCCTTA AGAACAAGAT AGAAACTATA TGCCGGGAGA TTTATGGTGC CGGCAGTGTA AAATACGCGG CGGAAGCCAA GCGGATGCTG CAAAAATATG AAGAATCAGG TTTTGGGGAC CTCCCGGTCT GCATAGCCAA AACCCAATAT TCTCTTTCGG ATAATGCTCA ACTACTAGGA AGACCCACGG GTTTTGAGGT AAATATAAGA CAAGTCAAGT TATCGGCGGG AGCAGGATTC GTGGTTGCTC TGGCGGGAGA TATTATGACC ATGCCAGGTC TCGGCAAAGT ACCGGCAGCG GAGAATATTG ATATAAAGCC TGACGGGGAG ATAGTAGGCT TATTTTAA
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Protein sequence | MKTDVEIAQS AKMQPITEIA DRIGIEPNEL ELYGSYKAKI SLDIMKRIED KPQGKLVLVT AISPTPAGEG KTTTTIGLGQ ALNKIGKKAI VALREPSLGP VFGIKGGATG GGYAQVVPME DINLHFTGDI HAVTTAHNLL AALMDNHLHQ GNELDIDSRQ IVWRRVMDLN ERVLRNIVLG LGGRINGVPR ESGFDISVAS EVMAALCLAT DLMDLKERFA KIVVAYSQQG QAITAGDLKA AGSMALLMKD AIKPNLVQTL ENTPAFIHGG PFANIAHGAN SIVATRLGVK LADYMVTEAG FGADLGAEKF FNIVCRYGKL VPDAVVLVAS IRALKHHGGV KKDKLGEENL EALAQGMENL KKHLENIQKF GVPAVVALNE FPSDTSKEID YVFSQCAAMQ TAVSISRVWA QGGEGGIDLA EKLVLATEQG SQFKFLYELN QPLKNKIETI CREIYGAGSV KYAAEAKRML QKYEESGFGD LPVCIAKTQY SLSDNAQLLG RPTGFEVNIR QVKLSAGAGF VVALAGDIMT MPGLGKVPAA ENIDIKPDGE IVGLF
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