Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1393 |
Symbol | |
ID | 4282628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1610715 |
End bp | 1611566 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638138273 |
Product | N-carbamoyl-D-amino acid amidohydrolase |
Protein accession | YP_754071 |
Protein GI | 114566917 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.600877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAGA CTTTATCCCT TTCCATCTGC CAGATGAAAA CAGGAAACGA TAAGGATGAG AATTTGAAAA AAGCGGGGGA AATGATTGCC GCTGCGGCCG GAGAAGGGGC GGAAATGGTG GTATTGCCCG AGGTTTTTAA TTCGCCTTAC CAGGCGGAGC TTTTTCCCCG TTATGCCGAG CCTTTTCCCG GCCCCAGCAC GGATTTTTTA GCTGCGGCGG CTTGCAAGCA TGGTTTGTGT ATTGTAGGTG GCTCTATAAT CGAAAGGGAT AGCCAGGGTA AAATATATAA CAGCAGCTTT GTTTTTGACG AGCGGGGAGA ACTTATCGGA CGCCATCGCA AAGCCCATCT TTTTGATATC GATATCCCCG GCCGGATTTC CTTTCGGGAA TCAGATACAT TGAATGCTGG GGAGAATATT ACTATTGTCC ACTACAAATC CCGGCTGTTC GCTTTGATGA TTTGCTATGA TTGCCGTTTC CCGGAACTTG CCCGGGCTGC AGCCCTGGAA GGAGCAGAGT TGCTGGTGAT TCCGGCCGCT TTCAACACTA CCACCGGTCC AGCCCACTGG AAACTCCTGA TGCGCTGCCG GGCGGTAGAC AACCAGCTAT TCGTGGTTGC CGCCTCTCCG GCCCGGAACC CCTCCGCCAG CTATCAGGCC TGGGGACATT CCCTGGTGGT TGACCCCTGG GGGGATATAC TGCAGGAAGC TGGGAGCGGT GAAGAAATCA TCCATGCCCG GCTGGACTTT TCCCGGCTGG AACAAGTGCG GCAGGAGCTG CCTCTTCTCC GGCAGCGGCG AAAGGATTTA TACCGACTGG ATTATAAGGC ACCAGGAAAC GGGATAGTTT AA
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Protein sequence | MDKTLSLSIC QMKTGNDKDE NLKKAGEMIA AAAGEGAEMV VLPEVFNSPY QAELFPRYAE PFPGPSTDFL AAAACKHGLC IVGGSIIERD SQGKIYNSSF VFDERGELIG RHRKAHLFDI DIPGRISFRE SDTLNAGENI TIVHYKSRLF ALMICYDCRF PELARAAALE GAELLVIPAA FNTTTGPAHW KLLMRCRAVD NQLFVVAASP ARNPSASYQA WGHSLVVDPW GDILQEAGSG EEIIHARLDF SRLEQVRQEL PLLRQRRKDL YRLDYKAPGN GIV
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