| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1390 |
|---|
| Symbol | |
|---|
| ID | 4282625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1608611 |
|---|
| End bp | 1609000 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638138270 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_754068 |
|---|
| Protein GI | 114566914 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1725] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000697536 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTTGG CTATTGATTT TCAATCCGAT ATCCCAATAT ATATCCAATT GAAGCAGCAG
ATCATTGCCG GCATTGCCAG GGGCGAACTA AAAGAAGGGG AAGAACTGCC CTCCGTACGC
CAGTTGGCTC AAGACATCGG AATCAACCTG CATACCGTCA ATAAAGCATA CAACCTTCTA
AAGGACGATG GCTTTATTCT TATGGACAGA AGAAAAGGCG CGTTAATAAA CAGCCTGGAA
AACATGGCGG ATGAGGATTT CAAGTTCAGG CTGCGGGAAG AGATTAATCC CCTGATAGCC
CAGGCATTTT GCAAGGGCAT GACGGAAGAG GAGTTGCTGT TGGAAATAGG CGAGATATAT
CGTAGTTATT CTCAAGGAGT AAAAAGATGA
|
|---|
| Protein sequence | MFLAIDFQSD IPIYIQLKQQ IIAGIARGEL KEGEELPSVR QLAQDIGINL HTVNKAYNLL
KDDGFILMDR RKGALINSLE NMADEDFKFR LREEINPLIA QAFCKGMTEE ELLLEIGEIY
RSYSQGVKR
|
|---|
| |