| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1383 |
|---|
| Symbol | |
|---|
| ID | 4281945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1604422 |
|---|
| End bp | 1605288 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638138263 |
|---|
| Product | putative ABC transporter ATP-binding protein; RBL01943 |
|---|
| Protein accession | YP_754061 |
|---|
| Protein GI | 114566907 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0134891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATG TTCTGGAGAT TAAAGGACTC AGCAAAAACC TGGGGAGCTT TCGCCTGGAT
AAAGTCAGCT TTTCTCTACC CCAGGGATAC ATCATGGGTT TTATCGGTCC CAATGGAGCA
GGGAAAACCA CCACCATCAA ACTGTTGATG AACCTGATGC ACCGTGACGG CGGGGATATT
CGGGTATTTG GCCTGGATAA CCGTCGCTAT GAAAAGGAAA TAAAACAGCG CATCGCTTTT
GTATATGACG AAAGCTATTA TTATGAGGAT TTGAGCCTGC AAGACAACCG CCGTATAGTG
GCCCGTTTTT ACCGGGATTG GGATGAGAAA GCCTTTCAGC GGCGTTTACG GGACTTTGAC
CTGCCGCCCC GCAAAAAGTT GAAAAACCTC TCCCGCGGTA TGCGCACCAA ATTCGGCCTG
GCCATAGCCC TCTCCCATAC TGCAGAGTTC CTTATTATGG ATGAGCCTAC TTCCGGGCTG
GATCCGGTAT TTCGCAGCGA GTTGATGGAT ATCCTGCAGC AATTGCTGGT GGAAGAAAAC
AAAAGCGTGC TGTTCTCCAC CCATATCACT ACTGATTTGG AACGGGTAGC AGATTATATC
TGTTTTATCA ACCAGGGTCG AATCGTACTC TGCCAAAGTA AAGACGAAAT ACTGCAGGGA
CATGTGCTGG TAAAAGGGGC TTTGGAACGG CTGAGCCCGG AGGCGGAAAG AATGTTTATC
GGCTTGCGCA AGAATCACTA CAGCTTTGAG GGTTTAAGTG CCGATCCCCG GGGTATACGC
CAGTTTTTCG GCGATGGGGT GTTGCTGGAG TCGCCGGGTC TGGATGATAT CATGGTCTTT
TATGTAAGGG GGAATCATCA TGTTTAA
|
|---|
| Protein sequence | MENVLEIKGL SKNLGSFRLD KVSFSLPQGY IMGFIGPNGA GKTTTIKLLM NLMHRDGGDI
RVFGLDNRRY EKEIKQRIAF VYDESYYYED LSLQDNRRIV ARFYRDWDEK AFQRRLRDFD
LPPRKKLKNL SRGMRTKFGL AIALSHTAEF LIMDEPTSGL DPVFRSELMD ILQQLLVEEN
KSVLFSTHIT TDLERVADYI CFINQGRIVL CQSKDEILQG HVLVKGALER LSPEAERMFI
GLRKNHYSFE GLSADPRGIR QFFGDGVLLE SPGLDDIMVF YVRGNHHV
|
|---|
| |