| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1381 |
|---|
| Symbol | |
|---|
| ID | 4281943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 1603038 |
|---|
| End bp | 1603763 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638138261 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_754059 |
|---|
| Protein GI | 114566905 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00877477 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTACGATA ATTGCCGGAC CATGTGCGGT GGAAAGCGAA GAAGGCTACC TGCAGATTGC
CCGCTTTCTC TGGGAGGCCG GGGCTCATGC CTTGCGCGGC GGTTTAAACC CCGCACCTCA
CCGTATTCCT TTAAGGGCCT GGGTCGGCAA GGCCTGGAAA TAATGCTGGA AGCTCGCCGT
ATTACGGGGC TGCCCCTGGT GACAGAGATA ATGGATGTCC GGGATCTGGA GCTTTTTGAT
GATAATATTG ATATTTTGCA GGTGGGGAGC AGAAACATGC AAAACTATTC CCTGCTGGAA
GAGCTGGGAA AATTGCAAAA ACCTATCCTG CTCAAACGTG GATTGTCTGC AACTATAGAG
GAGTGGCTAC TGGCGGCGGA ATATGTTCTG GACGGGGGAA ACCCCAATGT AATTTTATGT
GAACGGGGAA TCAGAACCTT TGAAAGCTAT TTGCGCAACA CCGTTGACAT AGGGGCAGTG
GCCCTGCTCA AGGAGCTTTC CCATTTGCCT GTGCTTGTGG ATCCCAGTCA CGCCACCGGG
AAATGGAAAA TGGTTACTCC CGTAGCCCGC GCGGCCATAG CCGCAGGGGC GGATGGCCTG
ATGGTGGAAG TTCACCCGGA TCCAGACCAG GCTCTGTCCG ATGGCAAGCA GTCTTTGACC
CCGGATAATT TCCTGAAGAT GTATGAACAA GTAATCCGGA TTTCCCGGCT GGTAAAGAAC
TTCTAA
|
|---|
| Protein sequence | MYDNCRTMCG GKRRRLPADC PLSLGGRGSC LARRFKPRTS PYSFKGLGRQ GLEIMLEARR
ITGLPLVTEI MDVRDLELFD DNIDILQVGS RNMQNYSLLE ELGKLQKPIL LKRGLSATIE
EWLLAAEYVL DGGNPNVILC ERGIRTFESY LRNTVDIGAV ALLKELSHLP VLVDPSHATG
KWKMVTPVAR AAIAAGADGL MVEVHPDPDQ ALSDGKQSLT PDNFLKMYEQ VIRISRLVKN
F
|
|---|
| |