| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1367 |
|---|
| Symbol | |
|---|
| ID | 4282793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1581900 |
|---|
| End bp | 1582637 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638138247 |
|---|
| Product | ABC-type multidrug transport system ATPase component-like protein |
|---|
| Protein accession | YP_754045 |
|---|
| Protein GI | 114566891 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0150774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAACTGC AAAACATCTC GTATCAATAC GGAAATCATA AAGCAGTAGA TAACTTGAGC
TTAATCGTTC AGAAGGGTGA AATCTTTGCC CTTTTAGGCC CCAATGGCGC AGGCAAATCC
ACCACCCTAA AAATGCTAAC CGGGCTGCTG AAGCCTAAAA GTGGGCACAT CCTGCTTGAT
GGACAAGATA TCTGGGCAAA AGGCAGCGAG TCCACACGGA AACAAATTGG CTATGTGCCT
GATCAACCGA TCCTTTATTT CAGGCTCACT GCCAAAGAAC ATCTCTACTA TAGCGGGAGA
TTATTGGGTT TAGAAGAATC TATTTTAATG GATCGAATCA ATCATCTGCT GGAGTTATTT
GATCTGCTGC CATACCAGGA GCAAATGATT GAAACATATT CTCAGGGAAT GCAAAGGAAG
GTTTCTATGT GTCTGGCCTT GCTTAACGAT CCCCAGCTAT TAATTGTCGA TGAATTGACC
AACGCTTATG ACGCAAAAAC CATCGCGGTA ATTAAGAAAG TTTTCAAAGA GAGGAAAGCG
GCTGGAAAGA CTGTGCTTTT CTCCGGTCAT GTGATGGCGG TGATGGAGGA ATTGGCCGAT
TATATCGTTA TCATCCAAAA AAGTATTTGC TATGCCTCAG GAACTATGGC AGAACTAACG
GCTCAATATG GCAACAGCAA CTTGGAAGAT TTGTTTTTAC AGCTAACTGA TGCCCAAATT
AATGACCAGG TGGGATAA
|
|---|
| Protein sequence | MELQNISYQY GNHKAVDNLS LIVQKGEIFA LLGPNGAGKS TTLKMLTGLL KPKSGHILLD
GQDIWAKGSE STRKQIGYVP DQPILYFRLT AKEHLYYSGR LLGLEESILM DRINHLLELF
DLLPYQEQMI ETYSQGMQRK VSMCLALLND PQLLIVDELT NAYDAKTIAV IKKVFKERKA
AGKTVLFSGH VMAVMEELAD YIVIIQKSIC YASGTMAELT AQYGNSNLED LFLQLTDAQI
NDQVG
|
|---|
| |