Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1358 |
Symbol | |
ID | 4282784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1572514 |
End bp | 1573473 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638138239 |
Product | hypothetical protein |
Protein accession | YP_754037 |
Protein GI | 114566883 |
COG category | [V] Defense mechanisms |
COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGCATTC GATATATCAG GATTGGATTG ATTTCTTTAC TTATTTTATT ATTAGGAACA ATAAATCATG CTATATATAC TGACAATTTG TCTGACCGTC CCGGGAAAAA TCTGGATTTT CTGCCTTATG CTACATCAAA GGACAGAATT ATTTATTCAA CCCCATCTGC TTCAAGCTCA GTAACTTTAC TTCCCTGGGA AAATGACCCG GACTTTCAAG CAGCTATGGC CGAGAATAAA GCCAAGATAC AATTAGCCAA CTACTGTACA GTATTACAGA ACCCTTTGCC GGGGGAAGAG ACCAACGTTT ACATTGCTGC CTGCTTATTG CAAGGAACAG TTGTAAAATC CGGCCAAATA TTTTCTCAAA ATGAGAAAAT TGGGCCCTAC AGCCAGGATA AAGGATTTCA ACCTGGACCC GTTTATATTG GCCATCAGTT AAAAACTACG GTTGGCGGGG GGGTATGCAA AATTGCTTCA ACCCTGTATA ATGTTACAAT TTTGTCGAAT TTGCCGGTTA TTGAACGATA CGCCCACAGC ATGCCGGTTC CCTATGTGCC GCTCGGGCAA GATGCAACGG TTTGTTATGG AGTTAAGGAT TTTAAATTTT TGAACAATAG CCCTTATCCT ATTTTAATCT GGGCAGAGAG TATCGGGAAC CGGCTTTATA TTGCCTTCTA TGGGCAAACA ACTCCTCCTA AAGTTAAATG GCACCACGAA ATAGTAAAAG AAATTAAAAC TTATAATATT TACAGGAAAA ACTATGCCCT TGAGGCTGGA AAAGAAAAGG TGATTTTGCA AGGGATGGAT GGTGCGGTAG TACGGTCATG GCTGACCATA GAAGATCCCC AGCAGGGTAG AATAACCACC AAAAAACTGG GCAAAGATTA TTACAATCCC ATGCCTTCGA TTGTTGAAAA AGGCATGAAG AAAGCCACTT CCACGATTCC ACCTCATTAA
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Protein sequence | MRIRYIRIGL ISLLILLLGT INHAIYTDNL SDRPGKNLDF LPYATSKDRI IYSTPSASSS VTLLPWENDP DFQAAMAENK AKIQLANYCT VLQNPLPGEE TNVYIAACLL QGTVVKSGQI FSQNEKIGPY SQDKGFQPGP VYIGHQLKTT VGGGVCKIAS TLYNVTILSN LPVIERYAHS MPVPYVPLGQ DATVCYGVKD FKFLNNSPYP ILIWAESIGN RLYIAFYGQT TPPKVKWHHE IVKEIKTYNI YRKNYALEAG KEKVILQGMD GAVVRSWLTI EDPQQGRITT KKLGKDYYNP MPSIVEKGMK KATSTIPPH
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