Gene Swol_1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1354 
Symbol 
ID4282780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp1568148 
End bp1569260 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content49% 
IMG OID638138235 
Productmultidrug-efflux transporter 
Protein accessionYP_754033 
Protein GI114566879 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATAT TGCCATACTA CGCTGAATCT ATGGGAGCCA GTGCCTTCCA ATTGGGTTTA 
TTGATGACCG TTTATGCCCT CTGCCAGTTC ATCTTTGCAC CCTTCTGGGG AAGCTATTCC 
GACCGGGTAG GACGAAAACC GGTGTTATTA GTGGGGATGT TTGGTTTTAC TCTGACCTTT 
TTTATTTTTG CCCTGGCTAA TTCCTTATGG GTTCTTTTCG TTGCTAGGAT AGCCGGCGGA 
GCTTTATCCT GTGCCACTGT ACCCACGGCT ATGGCGGTGA TGGGTGATAC CAGCAGCCCG 
GAAAAAAGAG GAGCCAGTAT GGGGATGGTA GGGGCTTCCA TGGGGATGGG TATGATATTC 
GGCCCGGCTA TAGGAAGCGG TCTGGCCCAT ATATCCCTGG CTGCTCCTTT TGTGATGGCG 
GGTTCTTTGT CGGTTGTGAT CTGTTTTTGC ATACTCTTTC TGGTTAAAGA GTCTTTACCT 
GTGGAAGACC GGGTTTCTGA AGCGCAAAAA ATTGACCGCG CCCCCCTCCT GAAAGGTTTA 
AAAAGCCCCC TGGCTTTTTT ATTTACCGCC ATGTTCCTGG CTAGCATGGC GGAAGCCACC 
AATATGGGTA CCTTTGCGTT ATTTGCGGAA GGCAAGCTGG GTTTTGGGCC CACCAGTATG 
GGGTTGATAT TTAGCTGTGC TGGCCTGGCT TCGGTACTGG TTCAGGGATT CGTGGTAGGA 
AGGGCTATAA ATAAATGGGG GGAAGAAAAG ACCAGCGGGG CCGGTATTAT TCTTATGGCT 
TCGAGTTTTG CTCTTTTTTT GCAAGCCAAA AGTCTGCTGG AATTAATCAT CTACATGGGA 
ATATTTTCCG CGGGAACCGG TTTGATCCGT CCTTCCATTT CTGCCGCCAC CTCCAAGAGA 
ACCACGGGTT CGCAGGGAAC GGCCATGGGT GTTCTACAAG GTTATGACAG CTTGGGCCGG 
GTTATTGGTC CTTCCCTGGG GGGATACTTG CTGGATATGA ATCTGAGCTA TGCCTATTTC 
TCCGCAATCT TCTTTTCCGG ACTGGCTTTC TTAACCCTGC TTTTTAATCG TAGTAGAGGG 
AAAACCAAGG AACGGGAAAA TCTTCTTATT TAA
 
Protein sequence
MPILPYYAES MGASAFQLGL LMTVYALCQF IFAPFWGSYS DRVGRKPVLL VGMFGFTLTF 
FIFALANSLW VLFVARIAGG ALSCATVPTA MAVMGDTSSP EKRGASMGMV GASMGMGMIF 
GPAIGSGLAH ISLAAPFVMA GSLSVVICFC ILFLVKESLP VEDRVSEAQK IDRAPLLKGL 
KSPLAFLFTA MFLASMAEAT NMGTFALFAE GKLGFGPTSM GLIFSCAGLA SVLVQGFVVG 
RAINKWGEEK TSGAGIILMA SSFALFLQAK SLLELIIYMG IFSAGTGLIR PSISAATSKR 
TTGSQGTAMG VLQGYDSLGR VIGPSLGGYL LDMNLSYAYF SAIFFSGLAF LTLLFNRSRG 
KTKERENLLI