Gene Swol_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1350 
Symbol 
ID4281895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1561656 
End bp1564319 
Gene Length2664 bp 
Protein Length887 aa 
Translation table11 
GC content42% 
IMG OID638138231 
Productcyanophycin synthetase 
Protein accessionYP_754029 
Protein GI114566875 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase
[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02068] cyanophycin synthetase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTGG TTAATATGCG CAATTATAGC GGCAGGAATA TATACAGCCA TAAACCTGTT 
GTTAAGATGA TAGTAGAATT AGGTGATTGG GCAGAAATCA CAACCAATGA GATTGCCGGT
TTTAATGATA GATTATTAAG CTGTTTCCCG GGTTTAAGCA ACCACCACTG TTCACCCGGT
TATGAAGGTG GATTTGTGCA GAGGCTGAAG GAAGGTACCC TGGTATCTCA TGTTACCGAG
CACCTGGCTC TTGAGCTGCA ATGCATCCTG GGCTATGATG TCTATTTCGG CAAAACCCGG
CTAATAAAGG AGCCTGATAG ATACTGTATT ATATATGAGT ATATAAATGA GAGTTGTGCT
TTGGAGGTAG GCAATGCTGC TGCGGAAATA GTATTTGCCT TGGCTAGGAA CGATGCTATT
GCTATTGATA AAGTATTAAA GCGCTTGCAG CAAATTTCCT TTGACTCCAA GCTGGGCCCC
AGTACTCAAG CTATTTATGA TGAAGCGAGG CGGCGTCATA TACCGGTTAG ACGCCTGGGC
GGGGACAGTT TATTGCAACT TGGTTATGGC AAACAGATGC GTTTTATTGA GGCCTCCCTG
CCTGGTAGCA CAAGTAGTAT CGCAGTCGAT TTGGCCAAGA ATAAGCAAAT GGTTAAGGAT
TTATTAAAAG AAAATAATAT TCCAGTGCCT TGCGGGGGAA TTGTAAATTC TGAGGACGGG
GCCGTTGTTT TGGCGGAACA AATAGGCTAT CCCATCGTGG TAAAGCCCTG GGATGCCAAC
CAGGGAAAAG GAGTTACCAC TAACATCGAA GATGAAAGCT TGTTGCGGAA GGCTTATCAC
CTGGCAAATT CTTTTGCTAA ACATATTATA GTTGAGAAAT ATATCCGGGG AAAAGATTAT
CGCATTTTAG TTGTAGGTAA TAAGGTTGCA GCGGTGGCAG AACGAAGACC TCCATATGTA
ATAGGTGATG GACTTCATTC TATTTCTGAA TTGCTTGAAG AGGCAAATAA GAATCCCAAC
AGGGGGATAG GCCATGAGAA ACCGTTAAGC AAAATTCTTT TGGATTCGGT AGCCAAAGAG
TTCCTGGCCC GGTCTGAATT AAATGAAAAC AGCATCCCTA AAATCGGAGA ACTAGTTTAT
CTTAGGGGGA ATGGAAACCT TAGTACCGGG GGTAGTGCCC GCGATTGTAC CGGGGATATT
CACCAGGTAA ATAAGGAATT GGCCATTAAG GCAGCTAAAA TAATAGGACT TAATGTAGCC
GGGATTGATA TGGTTACGGA AAATATCTCC GAGCCATTAA CACTGCAGAA TGGAGCAATA
ATCGAAGTAA ACGCCGCGCC AGGTCTTAGA ATGCATCTAT ACCCAAGCGA AGGTGAGGGC
CGAAATGTGG CTGCCGCTAT TCTTGATCAA ATGTATACCG CCGGAAGCAT GTCTTCGATT
CCCATAATAT CAATAACAGG TACCAATGGC AAAACTACCG TTGCCAGGCT GATTCGGCAT
GTTTTATCAC TTGCTGGCCA AAAGGTAGGC ATGACCTGCT CCAGCGGCAC TTATATAGGA
AAAGAATGTA TCGCGGAAGG TGATAATACC GGACCGCTTA GTGCCCACTC CATACTTTAC
AATAGAGATG TTGAGGTTGC GGTATTGGAA ACGGCCAGAG GCGGAATTAT TCGAAGAGGT
TTAGGATATG ACCTGGCCGA TGTTGGTGTC ATTACAAATA TTAGTGGAGA TCATTTGGGA
ATGGATGATA TTAATACTTT GGAGGATATG GCTTTTGTCA AATCTTTAGT AGTTGAGGCA
ATAAAACCGA ATGGTTATGC GGTTTTAAAC GCAGATGACG GGATGACTGA GCATATTGTC
CGCAAAGCTA GCTGTAATCC AGTGTTATTT TCCTTAAATA GGGATAATAT GCTGGTTGAA
GATCACATAA AGCAGGATGG TATGGCCGTA GTAATTGAAG AGGATCTTAT TGTCATATAT
CAAAACAAAA TTAGAGATGA AATCATGACA ATAAATGAAA TACCCATAAC TTTTAATGGA
AAAGCTATCT GTAATATTGA AAATTCATTG GCGGCGGTGG CCAGTCTTTC TGCTTTTGGC
CTGGCAAAGA ATGTAATCAG GTTGGGGTTA ATGTCTTTTA CATCCGATCC AACTGCCAAT
GAGGGCAGGT TCAATCTTTT TGATATGGGG AGTTTCCGCG TACTGCTTGA TTATGGACAT
AACTACAGTG CATATCAATC GGTGATGCAG TTCATTAATA ATATGAATGC TGCAAGACTG
GTCGGTATCA TAGGTGTTCC TGGAGACCGG CTTGATAAAA CAATTTTTGA TATAGGCCAA
ATATCCGGGC AAGCATTTTC CAAAATTTAT ATTAAAGAGG ATGAGGATCT TAGGGGAAGA
TCAGCTGGTG AGGTGGCTGG CATTTTATAT AATGGTGCTG TTAGTGGTGG GGCTGATAGG
GAGAACATGG AGATTGTTCT ATCGGAAACA GATGCTTTAA ATGCCGCTAT TAACAATGCA
TTTACGGGAG ACCTGATTGT AATGTTCTAC GAGAAATTTG ATAAAGCTTA TGAATTGATA
GAGTCATTTT TTAAGGGACA ACCCCAGCCA ATACCTTTGC TTCCTAATAC GGACACCTGC
TATATTTACC AATCCATTTG CTGA
 
Protein sequence
MEVVNMRNYS GRNIYSHKPV VKMIVELGDW AEITTNEIAG FNDRLLSCFP GLSNHHCSPG 
YEGGFVQRLK EGTLVSHVTE HLALELQCIL GYDVYFGKTR LIKEPDRYCI IYEYINESCA
LEVGNAAAEI VFALARNDAI AIDKVLKRLQ QISFDSKLGP STQAIYDEAR RRHIPVRRLG
GDSLLQLGYG KQMRFIEASL PGSTSSIAVD LAKNKQMVKD LLKENNIPVP CGGIVNSEDG
AVVLAEQIGY PIVVKPWDAN QGKGVTTNIE DESLLRKAYH LANSFAKHII VEKYIRGKDY
RILVVGNKVA AVAERRPPYV IGDGLHSISE LLEEANKNPN RGIGHEKPLS KILLDSVAKE
FLARSELNEN SIPKIGELVY LRGNGNLSTG GSARDCTGDI HQVNKELAIK AAKIIGLNVA
GIDMVTENIS EPLTLQNGAI IEVNAAPGLR MHLYPSEGEG RNVAAAILDQ MYTAGSMSSI
PIISITGTNG KTTVARLIRH VLSLAGQKVG MTCSSGTYIG KECIAEGDNT GPLSAHSILY
NRDVEVAVLE TARGGIIRRG LGYDLADVGV ITNISGDHLG MDDINTLEDM AFVKSLVVEA
IKPNGYAVLN ADDGMTEHIV RKASCNPVLF SLNRDNMLVE DHIKQDGMAV VIEEDLIVIY
QNKIRDEIMT INEIPITFNG KAICNIENSL AAVASLSAFG LAKNVIRLGL MSFTSDPTAN
EGRFNLFDMG SFRVLLDYGH NYSAYQSVMQ FINNMNAARL VGIIGVPGDR LDKTIFDIGQ
ISGQAFSKIY IKEDEDLRGR SAGEVAGILY NGAVSGGADR ENMEIVLSET DALNAAINNA
FTGDLIVMFY EKFDKAYELI ESFFKGQPQP IPLLPNTDTC YIYQSIC