Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1347 |
Symbol | |
ID | 4281892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1557352 |
End bp | 1558638 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638138228 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_754026 |
Protein GI | 114566872 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000289387 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAAGA TAAATAGTGC TTTGAAACCA TTAAAGGGAG ACGTTTCGGT TGATGCAGAC AAGTCCATAT CTCACCGGGC AGTAATTTTT TCTGCCCTTG CTCCGGGGAA GAGTATTATT AAAAACTTCT TACAGGCCAA CGATACCCTT TCCTCCTGTT CCTGCCTTCG GCAATTAGGG ATAAAGATTG CAGCCATGGA TTCCGAGATG CAGGTTTATG GGCGCGGCTT AAGCGGCTTT AGCGAACCGC ATACGGTGCT GGATTGTGGA AATTCCGGCA CTACCATGCG ACTAATGGCT GGCTTATTAT CTGCACAGCC CTTTCTCTCG ATTCTTAATG GAGATGAGTC TTTGAACCAG CGGCCGATGA AACGGATTAT AGAACCTCTG GGCATCATGG GAGCTAATAT ACAAGCACGG CAAAATGGTA ATTATCCCCC GCTGGTAATT AGAGGGAATA GACTTTCCGG CTTGAGCTAC CAGCTTCCAG TGGCCAGTGC TCAAGTAAAG TCGGCCCTAA TGCTGGCGGC TTTAAATGCT GATTCCGAAA CCTTGCTAAG CGAACCGCAA AAAACACGGG ATCATAGCGA GCGGATGCTT ACCGCCATGG GAGCAGATAT TGCTGTTAAT GGCCTGGAAA TAAGGCTGAA ACCAGGCAAA GAACTTCAAG CTACGGAGTT CCTGGTTCCT GGTGATATTT CATCGGCGGC TTTTTTCATG GTGGCTGCTA GCATAATACC AGGCTCGGAA TTACTCATTC GCCATGTGGG GGTAAACCCC AGCCGGGCAG GAATAATTGA GATTTTAAAT GAGATGGGAG CTCGAATCAA GCTGGAAAAT GAGCGGACTA TCAGCGGAGA ACCCGTTGCC GATCTTATTG TTTCACATTC TCGACTGCAA GCGATTGACA TCGATGGTGC CGTTATACCT CGTCTTATTG ATGAAATTCC TATCCTGGCT GTAGCCATGG CCCTGGCTGA GGGAGAGTCA ACTGTCAGGG GAGCTGCGGA GTTAAGGGTT AAGGAAACGG ACCGTATTGC CGCCATTTCT ACTGAACTGG CCAAAATGGG TGCGGACATC AGGGAACGGT CGGATGGTTT TGTAATCAAG GGTAAACCGG ATTCTCTAAA GGGTGGCCGG GTGGCCAGCA AAGGGGATCA TCGTATAGCC ATGAGCCTGG CGGTTGCGGC ATTGGCGGCC AAGGGGGAAA GTGTGATTGA GGATTCAGAG GTGGTGAACA TTTCTTTTCC CCGCTTTTGG GATTTGCTCA ATACTTTAAC TTCTTAA
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Protein sequence | MRKINSALKP LKGDVSVDAD KSISHRAVIF SALAPGKSII KNFLQANDTL SSCSCLRQLG IKIAAMDSEM QVYGRGLSGF SEPHTVLDCG NSGTTMRLMA GLLSAQPFLS ILNGDESLNQ RPMKRIIEPL GIMGANIQAR QNGNYPPLVI RGNRLSGLSY QLPVASAQVK SALMLAALNA DSETLLSEPQ KTRDHSERML TAMGADIAVN GLEIRLKPGK ELQATEFLVP GDISSAAFFM VAASIIPGSE LLIRHVGVNP SRAGIIEILN EMGARIKLEN ERTISGEPVA DLIVSHSRLQ AIDIDGAVIP RLIDEIPILA VAMALAEGES TVRGAAELRV KETDRIAAIS TELAKMGADI RERSDGFVIK GKPDSLKGGR VASKGDHRIA MSLAVAALAA KGESVIEDSE VVNISFPRFW DLLNTLTS
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