Gene Swol_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1317 
Symbol 
ID4282258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1521389 
End bp1522609 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content45% 
IMG OID638138198 
Productaspartate kinase 
Protein accessionYP_753996 
Protein GI114566842 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.573615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCACTAA TAGTAGCAAA GTTTGGTGGA AGTTCAGTTG CATCAATAGA TAAAATCAAG 
CATATTGCCG GACGGATTAA AGGAATGCGC GATAAAGGCG ATGATATAGT TGTAGTTGTC
TCCGCCATGG GTGATACCAC GGATGAGCTG ATTGAACTGG CCAGTCTCAC CGGTCATGAT
TTATGCAAAC GGGAAATGGA TATGCTTCTA GCTACTGGAG AGCAGCAATC AGCTGCCTTA
CTGGCTTTGA CTCTAAATAA TTTTGCTTGC TCGTCTATTT CATTAACCGG TTGGCAGGCG
GGAATAAAAA GCGATGACAG CCATAGTAAG GCTCGGATTA CCGGAATTGA AACCGGCCGC
ATAAAAAACG AACTGAAACA GGGTAATGTG GTTATTATAG CCGGTTTTCA GGGCCTGTCT
CCCCAGGGTG ATATCACAAC TTTGGGGAGA GGGGGTTCCG ATACTACTGC AGTGGCCCTG
GCTGCTTGTC TTGATGCTTT GCGCTGCATG ATATTTACCG ATGTTGAAGG AGTGTTTACC
GCTGATCCCC GAATAGTAAA AGAAGCTAAA AAACTACCCC AGATATCTTA TGAAGAAATG
TTGGAAATGG CCAGCCTGGG AGCGGGAGTA CTACAACCCC GGGCGGCGGA ATTTGCTATG
TTGTATAATG TTGATGTGGA GGTTCTGAGT AGTTTTAGTC ATAATCCTGG AACCATAATA
ACGGAGGTAG CCAATATGGA AAATCATAGA GCAGTAAGTG GGATAGCGCA TGATTTGAAT
TGTGCTCGTT TTGCCTTATT TGATGTGCCC GACCAACCGG GCATAGCCAA AACCTTATTT
AAGACCCTGG CTGCTGAAAA CATTAATGTA GATATAATTA TCCAGAGCGC TATGAGAGAT
GGACGCAATG ATATTGCCTT TACCATTGAG GAAAAAGAGC TTTCCAGAGC TATTCCCGTG
GTGGAAGGAT TGGTAAAAAA AATCTGTGCT TCGGGTATGA CCTACGGAAA TGATGTAGCC
AAGGTATCGA TTGTCGGAGC GGGTATGCAG AGTAATATTG GCGTAGCCGC TGCTATGTTT
GAAGCTCTGG CGGACGAAGG TATCAACATA CATATGATAA GCACATCAGA AATCCGCGTT
TCCTGTGTTA TTGACGAGTG CCATATCAAA GCTGCGATTA AAGCTCTACA CCGGAAATTT
GAGCTGGATA AGATAGAGTA A
 
Protein sequence
MSLIVAKFGG SSVASIDKIK HIAGRIKGMR DKGDDIVVVV SAMGDTTDEL IELASLTGHD 
LCKREMDMLL ATGEQQSAAL LALTLNNFAC SSISLTGWQA GIKSDDSHSK ARITGIETGR
IKNELKQGNV VIIAGFQGLS PQGDITTLGR GGSDTTAVAL AACLDALRCM IFTDVEGVFT
ADPRIVKEAK KLPQISYEEM LEMASLGAGV LQPRAAEFAM LYNVDVEVLS SFSHNPGTII
TEVANMENHR AVSGIAHDLN CARFALFDVP DQPGIAKTLF KTLAAENINV DIIIQSAMRD
GRNDIAFTIE EKELSRAIPV VEGLVKKICA SGMTYGNDVA KVSIVGAGMQ SNIGVAAAMF
EALADEGINI HMISTSEIRV SCVIDECHIK AAIKALHRKF ELDKIE