| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1316 |
|---|
| Symbol | |
|---|
| ID | 4282256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 1520179 |
|---|
| End bp | 1521099 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638138196 |
|---|
| Product | integrase/recombinase |
|---|
| Protein accession | YP_753995 |
|---|
| Protein GI | 114566841 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.718184 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTGCTTA AATTTGCTAT TAAGGAATTT CAGGAGGATA GGGAATTCCG ACAGATTTCT
AAGGCAACAC TGACTAATTA CATGGGATGT TTAAAGGAAT TCCATACCTA CTGCCTTGAA
AAAGAGATTA TTGAAGTTAC GGACATTACA AGCAATACAA TAAAATCCTA TCTTATTTAT
TGCCAGAAGG AACGTGGCAA TAACCCCACT ACTATCAATT CTAAATTACG ATCAATTAAA
ATCTTCTTTA ATTATCTCCA AGAGATTGAA ATATTCAATG AAAAAAATAA TCCTATCCAT
AAGGTGAATT ACATTAAAGC CAATGTAAAA ATTGAAGTAT TTAGCGATAA GCAGATAAAT
GAAATGTTAT CTTACTACCG AAGAATTAAA ACCAGAGATA AATCCCTGTA TGCCTACAGA
GACAGTACCA TAATAATTAC TTTATTGGGT ACGGGTATGC GCCTGGGTGA ATTATGTAAC
CTTAAATGGA GTGATGTTGA TTTTGAAAAC CAGCATATTA TTTTATTTGG GAAATTACAA
ACTCAAACAT CAATTCCTAT GGCAGATAAG TTAAAATCTG AACTTCAGGA ATATAAATTG
TTTTGCCAAA AGCAATTTGG AAAATTACCT ATGTTTGTAT TTGTAGATAG AACAGGTAAA
CCCTTATCCC CTAATGCGGT AAAAAATATG TTTAAACGCT TAAAACAAAT TATGAATTTC
CCAAATGTTC GTTGTTGTGC TTATGACTTC AGACATACTT TTGCCCATAG ATTTTTGATG
AATGGGGGAG ATGTATTTAC ACTCCAAAAA TTATTAAGAC ATTCATCACC AGCAATGACA
GAAAGATATT TAGCAATATG GGGGACTGCT TTACAAGAAA GGGCAAACCA ATTCAATCCC
CTTAATAAAT TCAATTTGTA A
|
|---|
| Protein sequence | MLLKFAIKEF QEDREFRQIS KATLTNYMGC LKEFHTYCLE KEIIEVTDIT SNTIKSYLIY
CQKERGNNPT TINSKLRSIK IFFNYLQEIE IFNEKNNPIH KVNYIKANVK IEVFSDKQIN
EMLSYYRRIK TRDKSLYAYR DSTIIITLLG TGMRLGELCN LKWSDVDFEN QHIILFGKLQ
TQTSIPMADK LKSELQEYKL FCQKQFGKLP MFVFVDRTGK PLSPNAVKNM FKRLKQIMNF
PNVRCCAYDF RHTFAHRFLM NGGDVFTLQK LLRHSSPAMT ERYLAIWGTA LQERANQFNP
LNKFNL
|
|---|
| |