| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1281 |
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| Symbol | |
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| ID | 4281716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1479016 |
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| End bp | 1482240 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638138156 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_753961 |
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| Protein GI | 114566807 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATTA AGGAAGATTT GCACAAAGTA CTGGTAATTG GATCAGGGCC TATTATCATT
GGGCAGGCAG CCGAATTCGA CTATGCTGGC ACCCAGGCCT GCCGGGCATT AAAAGAGGAA
GGAATTGCAG TAGTACTCTT AAACAGCAAC CCCGCTACGA TAATGACTGA TGCTAATATT
GCCGATCATG TTTACTTCGA GCCCATAACG GTTGAAACGG TCAATAAGAT TATTGCCCGG
GAAAAACCGG ATGGTATAAT TGCTAATCTC GGTGGGCAGG TAGGTTTAAA TATGGCTCTG
GCTCTTGATA GAGCTGGAGT ATTGGAGGAA ACGGGAGTTC CTTTACTGGG TATGCCATTG
GATGCCATTG CCCGGGCTGA AGATCGGGAA AAGTTTAAAG CTACCATGCA AGAAATCGGC
GAGCCTATCC CCGAAAGCGA CATAGTACAT TCAGTGGAAG AAGCCATTCG TTTCGCTGAG
AAGATTGGTT ACCCGGTTAT TGTGCGACCG GCTTACACCC TGGGGGGGAC CGGGGGAGGC
ACGGCCTATG ATAATGAAGA ACTACAGCAG ATAGTGGTTA AAGGCTTGAA AAACAGCCCC
ATAAATCAAG CCTTGATTGA AAGAAGTGTA GCCGGCTTTA AAGAAATTGA ATTTGAAGTA
ATGCGGGACG CCAATGACAA CTGTATAACT ATTTGCAGTA TGGAAAATGT TGACCCTGTT
GGCATACACA CCGGGGACAG CATAGTGGTG GCTCCAGCTC AGACCCTGAG TGACGAAGAA
TACCAAATGC TGCGGGCTTC TTCTCTGAAA ATTATTCGCC ACTTGAAAAT AATCGGGGGC
TGTAATGTCC AATATGCCCT GGACCCTTTC AGCAAAAAAT ATTATGTCAT AGAGGTTAAC
CCCAGGGTAA GCCGTTCCAG CGCCCTGGCC TCCAAGGCAA CTGGATACCC TATTGCCAAA
GTTACCACCA AATTGGCTAT CGGTTATACG CTGGATGAAA TACCTAATGC AGTAACCGGT
AAAACCACCG CCTGTTTTGA ACCGGCTATA GATTATGTGG TTCTTAAAGT GCCCCGTTGG
CCCTTTGACA AGTTTGTTTT CGGTGATCGC AAACTAGGGA CTCAGATGAA GGCTACCGGT
GAAGTTATGG CCATTGACCG CAGCTATGAA GCGGCTTTCC TAAAATCCAT TCGCTCCTTG
GAAATAGGCC TGAACGGCCT GCGCCTGCCG GTACTGCAAG AAATGAAAGA TGAGGAATTG
CGCCAGCGTT TGGGAAAGGC GGATGATGAA AGGACTTTTA TTATTGCTGA AGCTTTGAGC
CGGGGATTTT CCTTGGACGA AATCTGGGAG ATTACCAGGA TAGATAAATA TTTCCTGAAA
AAAATGAAAA ACATTATAGA TTTTGCCCGG GTACTGGAAG AGAAAGAATT GGATTATGAA
TTATTGCGAG AGGCCAAGAA GATTGGCTTT TCCGATTTTG AAATAGCTGC AATCAAGGGG
CAAACGGAAG AAGAGATACG AAAACTAAGA AAAAAAGCGG GAATTCTTCC TACTTATAAA
TTAGTGGATA CCTGTGCGGC TGAGTTTGAT GCTGACACCC CCTATTTTTA TTCCTGTTAT
GAAGAGGAGA ATGAGGCCTG GCATGATCCG AACACTCGTA AAATTCTGGT TATAGGGGCG
GGACCGATCA GGATTGGGCA GGGAGTAGAA TTTGACTATT GCTCGGTGCA CTGTGTTTGG
GCTTTGCGGG ATGCAGGAAT AAAGGCCATC ATTGTAAACA ATAACCCGGA AACCGTCAGC
ACCGATTTTG ACACCTCCGA CCGCCTGTAT TTCGAGCCCC TGGTTTATGA GGATGTTATG
AATATCATTG ATGAAGAACA ACCCGAAGGG GTCATCGTCC AGTTTGGCGG GCAAACCGCC
ATTAACCTGG TTGCTGCTTT AAACCGGGCG GGAGTAAAGA TTCTGGGTAC TTCCAATGAC
AGCATTGACC GGGCGGAAGA CCGGGAGCGT TTTGATTTGA TGGTGGAGAA ACTGGGTATC
CCCCGTCCCC CGGGTAAAAC CGTGTTTTCT GTAGAAGAAG CAGTCAAAGC AGCAGAGAAG
ATAGGCTATC CGGTGCTGTT AAGGCCTTCT TATGTACTGG GGGGGCGGGC TATGGAAATA
GTTTACAATG TTGATGAACT CAGGCAATAC ATGCAGACGG CAGTAAATGT CAACCGGGAA
CACCCGGTAC TGGTAGATAA ATACTTGCTG GGCAAAGAGA TTGAAGTGGA TGCCGTTTGT
GATGGCTTGC AGGTCCTAAT TCCCGGGATC ATGCAACACA TTGAGAGGGC CGGGGTTCAT
TCCGGGGATA GTATGGCGGT TTTTCCCGCC CATGACCTGA GCCCGGCGAT TAAGGACAAG
GTGGTGGATT ACACGCTTAG ATTAGCCCGA GAATTGGAGG TCAAAGGCTT AATAAATATT
CAATTCGTAG AGTTTGAAGA TGAGCTCTAT GTTTTGGAGG TAAATCCCCG TTCCAGCCGA
ACCGTGCCTT TCATCAGCAA AGTAACCGGG ATTCCCCTGG TAAAGCTGGG AACCGAGATT
ATGTTAGGCA AGAGCCTGGA GGAACTTGCT TATAAGGGCG GTTTGCAGCC AGAACCAGAA
TTTTATGCCA TCAAGGTTCC GGTATTCTCC TTTAACAAGC TGGAACAGGT GGATATTACC
CTGGGGCCGG AAATGAAGTC TACCGGTGAA GTTTTAGGAA TAGACCGCTC CTTAAAAACC
GCCATCTATA AAGGGCTTCT GGAAGCCGGT GTGGAAATCT CCCATATAGG CACCATAGTT
GCTACAATAG CTGATAAGGA TAAAGATGAA GCTATTCCTA TTTTGTATGA ATTGAGCCAG
CTGGGCTTTA AGCTGGTAGC TACAGAAGGT ACGGCTATGG CCCTTAGAAA TAATGGTATC
GCAGTAGAAA CCGTCAAGAA AATTAAAGAA GGCTCACCAA ATATTGTAGA CTTAATTCGA
CAAGGTAGGG TAGACTTTGT AGTAAATACC CTTACCCACG GTCGTATGCC ATTTACTGAT
GGTTTTCAGA TTCGACGGGC GGCGGTAGAA TTAAATGTTC CGTGCTTAAC CTCCCTGGAT
ACCTTGAAAG TGGTCAAAGA GGTAATTACT GAGGGTGAAA AGACCGCTGC TATGGGGATT
ATGTCTCTGC AGGAATATGT CAAAATGAAC AAACCGCAAT CATAA
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| Protein sequence | MPIKEDLHKV LVIGSGPIII GQAAEFDYAG TQACRALKEE GIAVVLLNSN PATIMTDANI
ADHVYFEPIT VETVNKIIAR EKPDGIIANL GGQVGLNMAL ALDRAGVLEE TGVPLLGMPL
DAIARAEDRE KFKATMQEIG EPIPESDIVH SVEEAIRFAE KIGYPVIVRP AYTLGGTGGG
TAYDNEELQQ IVVKGLKNSP INQALIERSV AGFKEIEFEV MRDANDNCIT ICSMENVDPV
GIHTGDSIVV APAQTLSDEE YQMLRASSLK IIRHLKIIGG CNVQYALDPF SKKYYVIEVN
PRVSRSSALA SKATGYPIAK VTTKLAIGYT LDEIPNAVTG KTTACFEPAI DYVVLKVPRW
PFDKFVFGDR KLGTQMKATG EVMAIDRSYE AAFLKSIRSL EIGLNGLRLP VLQEMKDEEL
RQRLGKADDE RTFIIAEALS RGFSLDEIWE ITRIDKYFLK KMKNIIDFAR VLEEKELDYE
LLREAKKIGF SDFEIAAIKG QTEEEIRKLR KKAGILPTYK LVDTCAAEFD ADTPYFYSCY
EEENEAWHDP NTRKILVIGA GPIRIGQGVE FDYCSVHCVW ALRDAGIKAI IVNNNPETVS
TDFDTSDRLY FEPLVYEDVM NIIDEEQPEG VIVQFGGQTA INLVAALNRA GVKILGTSND
SIDRAEDRER FDLMVEKLGI PRPPGKTVFS VEEAVKAAEK IGYPVLLRPS YVLGGRAMEI
VYNVDELRQY MQTAVNVNRE HPVLVDKYLL GKEIEVDAVC DGLQVLIPGI MQHIERAGVH
SGDSMAVFPA HDLSPAIKDK VVDYTLRLAR ELEVKGLINI QFVEFEDELY VLEVNPRSSR
TVPFISKVTG IPLVKLGTEI MLGKSLEELA YKGGLQPEPE FYAIKVPVFS FNKLEQVDIT
LGPEMKSTGE VLGIDRSLKT AIYKGLLEAG VEISHIGTIV ATIADKDKDE AIPILYELSQ
LGFKLVATEG TAMALRNNGI AVETVKKIKE GSPNIVDLIR QGRVDFVVNT LTHGRMPFTD
GFQIRRAAVE LNVPCLTSLD TLKVVKEVIT EGEKTAAMGI MSLQEYVKMN KPQS
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