Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1270 |
Symbol | |
ID | 4281993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1468519 |
End bp | 1469535 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638138145 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | YP_753950 |
Protein GI | 114566796 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000102592 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAAAGG GCGTTAGACT TGCTATAGTT GGAGCAACAG GTGCTGTAGG GCAGGAAATG ATGAAGATTC TGGAAGAGCG AGAGTTTAAA GTTAAGGAGC TAATTTGCCT GGCTGACCCT CGCGAAGAAG GAAACAAAGT GAGATTCAGA GATGAAGATC TTACGGTTAA AGCAGCTAAT GCTGCGGCTT TCAAACAGGC AGATATAGCT TTATTTGCGG TTAATACTGA TATAAGTAAG GCTCTGGCTC CTCTGGCCCG GGAGAATAAT TGCCTGGTAA TTGATAACAG TTATGCTTTC AGATTGGAGG AAAATGTGCC TCTGGTAGTT CCCGAGGTAA ATCCGGAAGA CATTGCTAAG CATCAGGGTA TTATTGCTAA TCCTAATTGT TCTACCACCA TTATGGTAGT AGCGTTAAAC CCTATTCATA AGGCAGCCCG CTTAAAAAGG GTATTGGTGT CGACCTACCA GGCGGTTTCT GGAGCCGGAA AAGCTGGAAT CGATGAGCTT GAACAGCATG TTCGGGCCTA TTTGGCTGGA GATGATATAG TTCCTGAGGT TTTCCAACAT CCCATAGCCT TTAACCTGAT TCCGCATATT GATGATTTTC TATCAGATAA TTATACCCGC GAAGAAATGA AGTTGGTTTG GGAGACCCGC AAGATAATGC ACGCTCCGGA TTTGAAGATT GCTGCTACGG CAGTTAGAGT TCCGGTATTT AGAAGCCATT CCGAATCCAT CACGGTGGAG ACGGAACTAC CACTAAAGGT AGATGAAGTT AAAACGATTT TCTCCCAGGC CCCTGGAGTA GTATTACAGG ATCAACCGGA AAACAAACTA TATCCCATGC CCCTTTATAC TTCAAATAAG GATGAAGTCT ATGTAGGCAG GATCAGGCAG GATTTGTCTT TAGATAATGG CATTCTCTTT TGGGTGGTTG CCGACCAGAT TCGAAAAGGA GCAGCTACTA ATGCAATACA AATTGCAGAA ATAGTGGTTA ACGATAGTCT TTATTAA
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Protein sequence | MTKGVRLAIV GATGAVGQEM MKILEEREFK VKELICLADP REEGNKVRFR DEDLTVKAAN AAAFKQADIA LFAVNTDISK ALAPLARENN CLVIDNSYAF RLEENVPLVV PEVNPEDIAK HQGIIANPNC STTIMVVALN PIHKAARLKR VLVSTYQAVS GAGKAGIDEL EQHVRAYLAG DDIVPEVFQH PIAFNLIPHI DDFLSDNYTR EEMKLVWETR KIMHAPDLKI AATAVRVPVF RSHSESITVE TELPLKVDEV KTIFSQAPGV VLQDQPENKL YPMPLYTSNK DEVYVGRIRQ DLSLDNGILF WVVADQIRKG AATNAIQIAE IVVNDSLY
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