Gene Swol_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1269 
Symbol 
ID4281992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1467620 
End bp1468498 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content45% 
IMG OID638138144 
Productdihydrodipicolinate synthase 
Protein accessionYP_753949 
Protein GI114566795 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000240328 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCTC CCCGCTTAAT GACGGCTATG GTTACTCCCT ACGGGGATAA CTTGGAGGTA 
AACCTTTCCC AGGCGGCCAA ACTGGCCGAA TACCTATATG AAAATGGCAG TGAAGGTATT
GTTGTTTGCG GTACAACCGG TGAATCCCCG GTTCTAAGTG CTGATGAAAA GCTGCAGCTT
TTTGCGGCAG TAAAAGAAAA AATGGGGAAG AGGATTCCAA TATGGGCCGG TACCGGGTCC
AATTATACTG ATTACTCAAT CGAACTGAGC CGCAAAGCTG AAAAAACGGG AGTAGATGGA
ATTATGCTGG TTACTCCCTA CTACAACAAA CCCAGTCAGG AAGGCCTTTA CCAGCATTTT
AAGGCGATAG CCGGCAGTGT TTCCTTACCC GTAATGCTAT ATAATGTTCC TGGGCGTACG
AGTTGTAATC TTCTTCCTGA GACGGTTAAG AGGCTGGCGG CTATTGATAA TATTGTTGCT
ATCAAAGAAG CCAGCGGGAA TATGGATCAG GTTTCTCTCT TGAAGAACCT GGTTGGTGAT
GATATTCTGA TTTACTCCGG TGACGATTCG CTTACCCTTC CTATGCTGGC ACTGGGTGCG
TATGGCGTGG TAAGTATCGC TTCTCACCTG GTAGGCAAGA GAATGATAGA AATGATAGAT
GCCTTTGCCA GCGGTGACAA CAAAAAAGCA GCCGCTATTC ATGGTAAACT TTTTCCGCTA
TTCAAAGCTT TGTTTGTAAC TACCAATCCC GTTCCTCTCA AAGAAGCCTT GAATATGCTG
GGAATGGAGG TAGGTGGTTT CCGACTGCCT CTGACCGCTG CAACAGATAA CGAAAAGAAG
CAAATAAAGG ATATATTACT CCAGTATCAT TTATTATAA
 
Protein sequence
MSAPRLMTAM VTPYGDNLEV NLSQAAKLAE YLYENGSEGI VVCGTTGESP VLSADEKLQL 
FAAVKEKMGK RIPIWAGTGS NYTDYSIELS RKAEKTGVDG IMLVTPYYNK PSQEGLYQHF
KAIAGSVSLP VMLYNVPGRT SCNLLPETVK RLAAIDNIVA IKEASGNMDQ VSLLKNLVGD
DILIYSGDDS LTLPMLALGA YGVVSIASHL VGKRMIEMID AFASGDNKKA AAIHGKLFPL
FKALFVTTNP VPLKEALNML GMEVGGFRLP LTAATDNEKK QIKDILLQYH LL