Gene Swol_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1253 
Symbol 
ID4282100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1443157 
End bp1444605 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content46% 
IMG OID638138128 
Producthypothetical protein 
Protein accessionYP_753933 
Protein GI114566779 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAGG AAGGGCTGAA CCATAGGAGG TGTGGGTCAA CGAAAGTTAC TGAAAGTGAC 
AACTTAAAAC ACAGACAACT TCGAGAAGAA GGCTATCTGC AAAGGGTATC TGCGGAACAG
AGAGAGTATG CAGAAGCGTG CGCGTCACCG AAGATGACTG AAACCGACAG CACCAACACA
AACGAGCAGA CGGAAGGATT GCTGGAGCAA ATTCTAAGCA GAGATAATCT GAATCGTGCC
TACAAGCAGG TAAAGAGAAA CAAAGGTGCG GGTGGAATTG ACGGAATGCA GGTAGATGAA
CTTCTACCCT TCCTGAAAGA AAACAAGAAC GAACTTGTGC AATCCCTCCG GGACGGCAAA
TACCGTCCTA AACCCGTACG CAGGGTAGAA ATACCCAAAG AGAACGGGAA GACCAGAAAG
CTGGGGATAC CAACTGTCGT GGACAGGCTA ATCCAACAAG CGATTTGCCA AGTCTTGAGC
CTAATCTTTG AGAAACAGTT TTCAAACAAT AGCTTTGGAT TCCGACCGAA AAGGAGTGCA
CATGATGCAC TTAAAAGATG CCAGACCAAC ATTACAGATG GCTACAGATA CGTAGTCGAT
ATGGATTTGG AAAAGTACTT TGACACGGTC AACCAGAGCA AACTCATTCA GATACTATCG
GAAACGATAA AAGATGGACG AGTCATTGCG CTGATTCACA AATTCCTGCG AGCGGGAGTT
ATGGTAGGCG GAATGTTTGA AGACAGCCCC GAAGGAGTGC CGCAAGGCGG ACCCCTGAGT
CCACTGCTGG GAAACATCAT GCTGAATGAA TGTGACCATG AACTGGAAAG GCGCGGACAC
CGCTTTGTAC GCTATGCAGA TGATATGATG ATTTTCTGCA AAAGCAAGAA AGCGGCCAAT
CGTACGCTAA ACCACATCCT CCCATACATC GAAGAGAAAT TATTCTTGAG GGTGAATCGG
GATAAAACAC AGGTAGCACA CGTGAACAAG GTCAAATTTC TGGGTTATGG TTTCTACATC
CATAAAGGAG AAGGGAGGCT CAGGATACAT CCCAAGAGCG TCCAAAAATT TAAGGAAAAA
ATCCGGGAAG TCACAGGACG TAGTAACGGG ATGGGGATTG AGTCAAGGAA AATCCGATTG
AACCAAGTGG TTCGAGGATG GATGAATTAC TTCAAACTGG TAGATGCAAA GAACCTCATA
CAGGGATTGG ATGAGTGGAT AAGAAGTCGC ATTCGGATGG TTACATGGAA ACGATGGAAG
AAAGTCCGTA CACGTTCTGA AAATCTCAAA CACCTGGGAA TTAAGGAAGA ACGGGCATGG
ATGTGGGCGA ATACAAGAAA AGGCTACTGG CGTACCGCCC ATAGTCCAAT CTTATTAATA
GCCCTATCCA ACGAGAGGTT CAAACGTGCC GGATACCTCA GTTTGATGGA ATGCTACTCT
GCGAAGTAG
 
Protein sequence
MPKEGLNHRR CGSTKVTESD NLKHRQLREE GYLQRVSAEQ REYAEACASP KMTETDSTNT 
NEQTEGLLEQ ILSRDNLNRA YKQVKRNKGA GGIDGMQVDE LLPFLKENKN ELVQSLRDGK
YRPKPVRRVE IPKENGKTRK LGIPTVVDRL IQQAICQVLS LIFEKQFSNN SFGFRPKRSA
HDALKRCQTN ITDGYRYVVD MDLEKYFDTV NQSKLIQILS ETIKDGRVIA LIHKFLRAGV
MVGGMFEDSP EGVPQGGPLS PLLGNIMLNE CDHELERRGH RFVRYADDMM IFCKSKKAAN
RTLNHILPYI EEKLFLRVNR DKTQVAHVNK VKFLGYGFYI HKGEGRLRIH PKSVQKFKEK
IREVTGRSNG MGIESRKIRL NQVVRGWMNY FKLVDAKNLI QGLDEWIRSR IRMVTWKRWK
KVRTRSENLK HLGIKEERAW MWANTRKGYW RTAHSPILLI ALSNERFKRA GYLSLMECYS
AK