Gene Swol_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1230 
Symbol 
ID4282145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1421704 
End bp1422456 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content42% 
IMG OID638138105 
Producthypothetical protein 
Protein accessionYP_753910 
Protein GI114566756 
COG category[S] Function unknown 
COG ID[COG1852] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00155832 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCA AGAAACGAAT ATACATAGGC TTACTGGCAG CAAGTCTTTT TTTTGCCATA 
TTCGCTCTTT TTCTGCTATG GTATCTAGTA AGTAAACGGG AGTTTATAGT AAGCCAGTTT
CTTTTGCTGC TTATTCTGAC CCTGGTAATT TTACTCTTTC TGATTCTGGC TACCGGTATA
GTAGCAATAG TATTCATGAT ATTGCGGTCA AGGAGCATTC CTTCCCTGGA AAACATAACC
CAGTTGGCCA ATGAAATGCT TTTTCCCCTT ACTCTTATTG TGGGGCGGCT CATTGGCATA
GAAAAGGAAA AGATCCTGCG TTCCTTTATT GCCGTAAACA ATTACCTGGT TCGCTGTAAA
AAGCTTATAT TAAAAGAGGA ACAAATAATG CTATTGGTTC CCCATTGTTT GCAGAATTCA
GATTGTCCCC TCAAAATAAC GGTGGATGTC AATAACTGTA AAGAATGCGG GAAATGTAAA
GTAGGAGAGC TCAAGAAGCT GGCCAAGGAG CATGGGGCGA TACTAAAGGT GGCTACTGGT
GGTACCCTGG CCAGAAAGTT CATTGAAGAG AATAAACCCC GAGGAGTTAT AGCTGTAGCT
TGCGAAAGGG ATCTTTCATC AGGTATCCAC GACATGGGTT TTTTACCAGT AATGGGTGTG
CTCAACTGCC GGCCCAACGG TCCCTGTTTT AATACTGATG TGGAACTGGA AAGAGTGGAA
AATGCTCTTA ATATCATGTG TAAAGGAGGA TAA
 
Protein sequence
MEAKKRIYIG LLAASLFFAI FALFLLWYLV SKREFIVSQF LLLLILTLVI LLFLILATGI 
VAIVFMILRS RSIPSLENIT QLANEMLFPL TLIVGRLIGI EKEKILRSFI AVNNYLVRCK
KLILKEEQIM LLVPHCLQNS DCPLKITVDV NNCKECGKCK VGELKKLAKE HGAILKVATG
GTLARKFIEE NKPRGVIAVA CERDLSSGIH DMGFLPVMGV LNCRPNGPCF NTDVELERVE
NALNIMCKGG