Gene Swol_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1229 
Symbol 
ID4282144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp1421027 
End bp1421701 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content46% 
IMG OID638138104 
Producthypothetical protein 
Protein accessionYP_753909 
Protein GI114566755 
COG category[R] General function prediction only 
COG ID[COG2738] Predicted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0200777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTATC TGATTTTCAT TCTTCCCGCT TTAATTTTAT CGTTTTATGC CCAGATTAAA 
GTCAAATCAA CTTTTAGCAA GTACTCACAA GTCCGTTCGT CACGGGCTTA TACCGGAGCC 
GATGTGGCCA CTACCATACT GAGGAGAAAC GGTATGTCCG GTCAGGTGGC GGTAGAAGCA 
GTGGCAGGCA GTCTCTCTGA CCATTATGAT CCTGGCGCCA AAACCGTAAG GTTATCTGAA 
GATGTTTATG GCAGCAATTC TATTGCCGCT ATTGGAGTAG CGGCCCATGA AGTAGGGCAT 
GCCATACAGC ACAACCTGCA ATATGGCCCC CTGGAGCTAA GACACAAAAT GGTTCCGGTT 
ACCAATTTTG CTTCCTCGGC CTCATTTCCC ATCTTGTTGT TAGGGTTATT CCTGCAGCAA 
ATTGATTTGA TTTTTATAGG AATCATTCTT TTTTCAGCTG TAGTACTGTT TCATGTGGTA 
ACCCTGCCGG TGGAGTTTAA CGCTTCCCGA AGAGCTGTGG TCCAACTGGC GGATGCCGGT 
CTGGTAAGTA ATGAGGAAAT ACCCCTGGTC AAAAAGGTAC TGGGAGCAGC GGCCTTAACT 
TATGTGGCAG CAGCTCTTTC AGCTATAGCC AATCTACTTT ATTATCTATT GATTTTCATG 
GGTGGGGATG ACTAG
 
Protein sequence
MTYLIFILPA LILSFYAQIK VKSTFSKYSQ VRSSRAYTGA DVATTILRRN GMSGQVAVEA 
VAGSLSDHYD PGAKTVRLSE DVYGSNSIAA IGVAAHEVGH AIQHNLQYGP LELRHKMVPV 
TNFASSASFP ILLLGLFLQQ IDLIFIGIIL FSAVVLFHVV TLPVEFNASR RAVVQLADAG 
LVSNEEIPLV KKVLGAAALT YVAAALSAIA NLLYYLLIFM GGDD