Gene Swol_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1213 
Symbol 
ID4282477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp1403132 
End bp1404373 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content41% 
IMG OID638138087 
Producthypothetical protein 
Protein accessionYP_753893 
Protein GI114566739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000656739 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTGCC AGAGTTTGGA TAGGTTAATC TTTTCCTACT GTGATAATAA CCTCACCCCC 
AAAAAGCGTC TGGCGGTGGA GGAACACTTG CAAAAATGTT TTTCCTGCCG CCATAAATTA 
GATTTGGTAA TTTTAGAAAA TGAACTTATT AAGGAAGCAA CCGATATCCC CCAGCTTTCA 
GAATCTTTTA CCGGTGATCT GATGATGTTA ATTGAATCTC GTTATGGATC GATCGCCCCT 
CATGATGATA GTAAAGAATT GCCTGGGGCC ACCCTGGAAA AAAAGAAATC CAAATGGGGA 
ATTATGCGAG CCAGAGTGGC TATTGCTGCA GTGTTTTTAC TGGTTTTTAT GAGTGTTAGC 
TATTTACTGG AATCAGGAAA GATAAATGTG GCAGATAAGA CCGGCACCAA CACTCCAATT 
GTCCCCATAA CTCTAAAGCA GGATACACCC AAAGAAAGTA TATTATCAGC TCAAAGCAAG 
TCTAATACCT CAGTAGTTGA GAGTAAATTT AAAGAGGATG TCGCTAAATC ACCAGAATAT 
AACAATGCAC AAAAAATAAA AACGACACAG TCCCAGTTTG ATACTTCAAG CGAACAAAAC 
CGGCAATTAT CCCTTCAATC AACCACAAAT CAAACCCGCT TGGCGGATAA TAACAATAGA 
GATCTGCAGG AAGTAAATCG GGGCAAATTG TCACCCAGTG TTTACGATGA AGAACCAAAG 
ATGTTACTTC CCTCCGGTTT GCCTGAATCT TATCAATTGA TTGGGGCCAG TCAGGGTATA 
GAAGAGTATT CTTTTTCTTA TAAGAAGTTA GATAACGGAG TTGAGCTTAA GATTACAATA 
GTGCCCCAGT TAAAAAACGA TACTGATTCT CTATCTTTAG AGCCAGAAAA CCAGGCTATA 
GTTGCTCCTC CATCCACAAG CAGCAAAATG TTTTCGGAAA ACCTATCCAA TTACAGCAAA 
ATGGATACGG TAGAGCTTTC TATAGATGAA ATGAATAAAG AAAAGAATAG TGAAGCTCAG 
CAGCATTCTG CTAATCCTTC ACCAGATACC ACTGCTTCCC CGGCATCTAC GGAGATGCTT 
AATTCTATTA AAGAAACCCT GCTCATTAAT AAGCATGAGT ATCAAGTAAC TTTTAGCGGG 
TACCTTGCGC CAGAAGAGTT GGCCACTGTG GCCGCGGTAA TTGATTGGCA AGAGAGCAAA 
ATGACAACAG AACCCACCCT TTCTAAGGAA GCACAACGAT AA
 
Protein sequence
MDCQSLDRLI FSYCDNNLTP KKRLAVEEHL QKCFSCRHKL DLVILENELI KEATDIPQLS 
ESFTGDLMML IESRYGSIAP HDDSKELPGA TLEKKKSKWG IMRARVAIAA VFLLVFMSVS 
YLLESGKINV ADKTGTNTPI VPITLKQDTP KESILSAQSK SNTSVVESKF KEDVAKSPEY 
NNAQKIKTTQ SQFDTSSEQN RQLSLQSTTN QTRLADNNNR DLQEVNRGKL SPSVYDEEPK 
MLLPSGLPES YQLIGASQGI EEYSFSYKKL DNGVELKITI VPQLKNDTDS LSLEPENQAI 
VAPPSTSSKM FSENLSNYSK MDTVELSIDE MNKEKNSEAQ QHSANPSPDT TASPASTEML 
NSIKETLLIN KHEYQVTFSG YLAPEELATV AAVIDWQESK MTTEPTLSKE AQR