| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1212 |
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| Symbol | |
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| ID | 4282476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 1402553 |
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| End bp | 1403131 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638138086 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_753892 |
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| Protein GI | 114566738 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000198211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATAAGTG ATGAATTATT AGCAGAACAA GCACTGCTGG GGAATATTGC GGCATTTGAA
GAGCTGGTTA ACCGCTACAA AAAGTCAGTA TTTGCTATTG TCTACCGGAT AAGTGGACAA
TACCAAGACG CTGAGGATAT CAGTCAGGAA GTTTTTCTTA CCCTTTTTGA AAAGCTCTAT
CAATTTGATC GTCAAAAAAA GTTTTCGCCC TGGCTTCACC GTATTGCCGT AAACACCAGT
ATAAGTGCTC TTCGCAAGAA GAAAAACATA ATTAGTCTCA ATTTTGATGA GTCTTTTGTT
TCTATAGCAT TTAATAACCG TAGTCATTTC GATGCAGCTG ATCCGCATTT AATGTTAGAA
AGAGAAGAAC TTCGAGAGGA AATAGGCACT GCCATTATGC AATTGCCGGA AAGTTACCGA
ACAGTAATAG CCTTGCGTTA TCAAATGGAA TTTAGCAACC AGGAGATTGC TGATATACTG
GGAATTAGCA AGGATAATGT TGAGGTTAAA GTACACCGTG CCCGTATGGC ATTAAGAAAA
AGGATACTGA ATAATCGCAA GGAAAGGGGG ATAATATAG
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| Protein sequence | MISDELLAEQ ALLGNIAAFE ELVNRYKKSV FAIVYRISGQ YQDAEDISQE VFLTLFEKLY
QFDRQKKFSP WLHRIAVNTS ISALRKKKNI ISLNFDESFV SIAFNNRSHF DAADPHLMLE
REELREEIGT AIMQLPESYR TVIALRYQME FSNQEIADIL GISKDNVEVK VHRARMALRK
RILNNRKERG II
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