Gene Swol_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1212 
Symbol 
ID4282476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1402553 
End bp1403131 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content39% 
IMG OID638138086 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_753892 
Protein GI114566738 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000198211 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAAGTG ATGAATTATT AGCAGAACAA GCACTGCTGG GGAATATTGC GGCATTTGAA 
GAGCTGGTTA ACCGCTACAA AAAGTCAGTA TTTGCTATTG TCTACCGGAT AAGTGGACAA
TACCAAGACG CTGAGGATAT CAGTCAGGAA GTTTTTCTTA CCCTTTTTGA AAAGCTCTAT
CAATTTGATC GTCAAAAAAA GTTTTCGCCC TGGCTTCACC GTATTGCCGT AAACACCAGT
ATAAGTGCTC TTCGCAAGAA GAAAAACATA ATTAGTCTCA ATTTTGATGA GTCTTTTGTT
TCTATAGCAT TTAATAACCG TAGTCATTTC GATGCAGCTG ATCCGCATTT AATGTTAGAA
AGAGAAGAAC TTCGAGAGGA AATAGGCACT GCCATTATGC AATTGCCGGA AAGTTACCGA
ACAGTAATAG CCTTGCGTTA TCAAATGGAA TTTAGCAACC AGGAGATTGC TGATATACTG
GGAATTAGCA AGGATAATGT TGAGGTTAAA GTACACCGTG CCCGTATGGC ATTAAGAAAA
AGGATACTGA ATAATCGCAA GGAAAGGGGG ATAATATAG
 
Protein sequence
MISDELLAEQ ALLGNIAAFE ELVNRYKKSV FAIVYRISGQ YQDAEDISQE VFLTLFEKLY 
QFDRQKKFSP WLHRIAVNTS ISALRKKKNI ISLNFDESFV SIAFNNRSHF DAADPHLMLE
REELREEIGT AIMQLPESYR TVIALRYQME FSNQEIADIL GISKDNVEVK VHRARMALRK
RILNNRKERG II