Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1199 |
Symbol | |
ID | 4282609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1387411 |
End bp | 1388250 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638138072 |
Product | spermidine synthase |
Protein accession | YP_753879 |
Protein GI | 114566725 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | [TIGR00417] spermidine synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.928058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGGAT CCTGGATTTG TGAAAAGCAT ACCGAGGGTT ATGCGGTTAA ATGGAAAATC AAAGATATTC TACATGAGGA ACAGACCCGT TATCAGAAAC TAGCAGTGGT GGATACATTG GAATGGGGTA AAGCCCTGCT GCTGGATGAC GCCCTGCAAA TCAGTGAGAA AGATGAGTTT ATTTATCATG AAATGATAAG CCATGTGGGG ATGTGTACCC ACCCTTGCCC CGAGAGGGTA TTGATAATTG GCGGGGGTGA TGGGGGTACT TTACGAGAAG TACTGAAACA CCAGCAGCTT AATGCGGTAG ATTTGGTGGA AATAGATGAG CGGGTAGTGG AGAATAGCAA AAGGTTTTTC CCTGCCATAT CTTGCGGTTT TACCGATCGC CGCTTAAACT TACATATTGC TGATGGAGTT CACTTTGTAA AAGAGACCTC ATTCAGATAT GATGTAATTA TTGTAGATTC CTCTGATCCA TTAGGACCGG CCACACCGTT ATTTAACCTG GAGTTTTATC AGGATGTATA TAAGATACTC AAGGCGGACG GGCTTCTAGT GGTTCAGTCT GAATCCCCGA TTTTTTATGG GGAAGTATTT CGATCCGTTT ACCGGCAAAT CAACACGGTC TTTCCTCTGA CCCGGGTCTT CCTGGCGCCA ATAGCTACCT ATGTAAGCGG TCCCTGGTCT TTTACCATGG GCAGCAAGAA ATATAATCCC CGGGAATTGG CAAAAAAACC TGCTGATCTA GGCTATTTGA AGTATTATAA TGAAGGAATT CACCGGGCGG CATTTTGCCT TCCGCCCTAT ATCAAAGAAA TGATTTTATC TGTCAGATAG
|
Protein sequence | MTGSWICEKH TEGYAVKWKI KDILHEEQTR YQKLAVVDTL EWGKALLLDD ALQISEKDEF IYHEMISHVG MCTHPCPERV LIIGGGDGGT LREVLKHQQL NAVDLVEIDE RVVENSKRFF PAISCGFTDR RLNLHIADGV HFVKETSFRY DVIIVDSSDP LGPATPLFNL EFYQDVYKIL KADGLLVVQS ESPIFYGEVF RSVYRQINTV FPLTRVFLAP IATYVSGPWS FTMGSKKYNP RELAKKPADL GYLKYYNEGI HRAAFCLPPY IKEMILSVR
|
| |