Gene Swol_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1199 
Symbol 
ID4282609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1387411 
End bp1388250 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content44% 
IMG OID638138072 
Productspermidine synthase 
Protein accessionYP_753879 
Protein GI114566725 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID[TIGR00417] spermidine synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.928058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGAT CCTGGATTTG TGAAAAGCAT ACCGAGGGTT ATGCGGTTAA ATGGAAAATC 
AAAGATATTC TACATGAGGA ACAGACCCGT TATCAGAAAC TAGCAGTGGT GGATACATTG
GAATGGGGTA AAGCCCTGCT GCTGGATGAC GCCCTGCAAA TCAGTGAGAA AGATGAGTTT
ATTTATCATG AAATGATAAG CCATGTGGGG ATGTGTACCC ACCCTTGCCC CGAGAGGGTA
TTGATAATTG GCGGGGGTGA TGGGGGTACT TTACGAGAAG TACTGAAACA CCAGCAGCTT
AATGCGGTAG ATTTGGTGGA AATAGATGAG CGGGTAGTGG AGAATAGCAA AAGGTTTTTC
CCTGCCATAT CTTGCGGTTT TACCGATCGC CGCTTAAACT TACATATTGC TGATGGAGTT
CACTTTGTAA AAGAGACCTC ATTCAGATAT GATGTAATTA TTGTAGATTC CTCTGATCCA
TTAGGACCGG CCACACCGTT ATTTAACCTG GAGTTTTATC AGGATGTATA TAAGATACTC
AAGGCGGACG GGCTTCTAGT GGTTCAGTCT GAATCCCCGA TTTTTTATGG GGAAGTATTT
CGATCCGTTT ACCGGCAAAT CAACACGGTC TTTCCTCTGA CCCGGGTCTT CCTGGCGCCA
ATAGCTACCT ATGTAAGCGG TCCCTGGTCT TTTACCATGG GCAGCAAGAA ATATAATCCC
CGGGAATTGG CAAAAAAACC TGCTGATCTA GGCTATTTGA AGTATTATAA TGAAGGAATT
CACCGGGCGG CATTTTGCCT TCCGCCCTAT ATCAAAGAAA TGATTTTATC TGTCAGATAG
 
Protein sequence
MTGSWICEKH TEGYAVKWKI KDILHEEQTR YQKLAVVDTL EWGKALLLDD ALQISEKDEF 
IYHEMISHVG MCTHPCPERV LIIGGGDGGT LREVLKHQQL NAVDLVEIDE RVVENSKRFF
PAISCGFTDR RLNLHIADGV HFVKETSFRY DVIIVDSSDP LGPATPLFNL EFYQDVYKIL
KADGLLVVQS ESPIFYGEVF RSVYRQINTV FPLTRVFLAP IATYVSGPWS FTMGSKKYNP
RELAKKPADL GYLKYYNEGI HRAAFCLPPY IKEMILSVR