Gene Swol_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1122 
Symbol 
ID4282958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1298129 
End bp1298959 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content44% 
IMG OID638137994 
Producthypothetical protein 
Protein accessionYP_753803 
Protein GI114566649 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAC TTTGGAAAGG TGCGGTTAGT TTCGGCCTGG TTAATATTCC GGTAGCTATG 
TACTCGGCAA CGGAGAACAA GGATCTGAAA TTCCATTACC TGCATCAAGA ATGTATGGCG
CCGGTTAACT ATAAAAAGGT TTGTTCAAAA TGCAATAAGG AAATCAAAGC AGAAGAGATA
GTCAAGGGCT ACGAGTTTCA GAAAGGAAAC TACGTTATCA TCAGTGAAGA AGACCTGGCT
CGCATCCCTC AGGAAAACAC TAAAACCATT GATATATTGG ATTTTATAAA ATTAGAACAA
TTGGACCCGG TTTATTTTGA TAAAAGCTAT TACCTGGAGC CTGCTTCAGG TGGGGACAAA
GCTTATACAC TCATAGTTGA AGCCATGAAA AAGACAGGAA AAATTGCCCT GGCCAAAATT
ATGATACGCT CAAAACAATC ATTGGCGGCA CTGCGGGTGA GGGATGAGCA CTTAATTATG
GAAACCATCT TCTATCCGGA TGAGATTAGA TCTCCTGCTT CATTGGGGAA GGGGATTGGG
GTAGAGAAGC TGCATGAGAA AGAGATAAAA ATGGCGGTTA GTCTGATTGA GAATCTATCC
ATCGATTTCG ACCCGGCAAG ATATCAGGAC GATTATCGTC AAGCCCTCTG GGAGATGATT
GAGGCTAAAA TTGCCGGAGA GGAATTTGTT AGCCCGGCCC CGGAACGGCA AGCCGGTAAT
GTAGTGGACC TAATGGAAGC TCTAAAGGCC AGTGTTAAGC TGGCCGAAGA GAACAAGAAT
GAGGGGAAGA AAAAAGGCGG CCCGAAGAAA GCGGCTAAAA CCGGAAGTTA G
 
Protein sequence
MKTLWKGAVS FGLVNIPVAM YSATENKDLK FHYLHQECMA PVNYKKVCSK CNKEIKAEEI 
VKGYEFQKGN YVIISEEDLA RIPQENTKTI DILDFIKLEQ LDPVYFDKSY YLEPASGGDK
AYTLIVEAMK KTGKIALAKI MIRSKQSLAA LRVRDEHLIM ETIFYPDEIR SPASLGKGIG
VEKLHEKEIK MAVSLIENLS IDFDPARYQD DYRQALWEMI EAKIAGEEFV SPAPERQAGN
VVDLMEALKA SVKLAEENKN EGKKKGGPKK AAKTGS