| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1112 |
|---|
| Symbol | |
|---|
| ID | 4283649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1283262 |
|---|
| End bp | 1283798 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638137984 |
|---|
| Product | thymidine kinase |
|---|
| Protein accession | YP_753793 |
|---|
| Protein GI | 114566639 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1435] Thymidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0792599 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGA TCGAAATAAT TACCGGCCCC ATGTTTGCGG GTAAAACAAC CGAATTGATG
CGAAGACTTG AACGCTATAC CCTGGCAGGC AACAATGTTG TTCTATTCAA ACCACATATT
GACAGCCGAA CCGAGACGGA GATAGCCACA ACCTCGGTCA GGCAGCAATT CAGCATTCCA
GTTTTGGTCC TGCATAAACC AATCGGCATT GAAGCTGCTG TGGTGGCAAT CGATGAAGCC
CAGTTTTTTG GAGAATGGAT TTTAACCTAT GTTCAATCAC TCAAGGACCA GGGTAAAACC
GTAATAATAT CCGGTTTAGA TATGGATGCT CATCGGCGTC CATTTGGATT TATGGGTCAG
CTTATGGCCA TAGCTGATTC AGTAAGCAAA TTGACTGCTG TTTGCCGCTG TGGCGAAGAT
GCGGTATACA CCTGGCTCAA AAACAGTCTC CCACAGCCCA AGGGAAATCT TATTTTAATC
GGTGACAGTG AAAGATATGA GCCCAGATGC CGAAAATGCT ACGCATCCAA GACATGA
|
|---|
| Protein sequence | MGKIEIITGP MFAGKTTELM RRLERYTLAG NNVVLFKPHI DSRTETEIAT TSVRQQFSIP
VLVLHKPIGI EAAVVAIDEA QFFGEWILTY VQSLKDQGKT VIISGLDMDA HRRPFGFMGQ
LMAIADSVSK LTAVCRCGED AVYTWLKNSL PQPKGNLILI GDSERYEPRC RKCYASKT
|
|---|
| |