| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1108 |
|---|
| Symbol | |
|---|
| ID | 4283643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1275796 |
|---|
| End bp | 1278144 |
|---|
| Gene Length | 2349 bp |
|---|
| Protein Length | 782 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638137978 |
|---|
| Product | recombination and DNA strand exchange inhibitor protein |
|---|
| Protein accession | YP_753789 |
|---|
| Protein GI | 114566635 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01069] MutS2 family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0684525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGTTG ATGAAAAAAC TCTAATAAAA CTGGAATATA ACAAAATAAG AGAGAAACTG
CAAAGGCTCA GTTCTTTTGC GGGTGGGCAG AGAAAAGCTG AAGAAATGAG ACCTTCCAGT
GATATTGCTG TGATTATAAG GCGGCTGGAT GAGACGGGTG AAGCCATGGA AGCCATGCGT
TTTTCCGAAC CTGCTTTTCT ATACGGACTT AAGCTGGTGG ATTCACAGCT GGCCAAGGTC
AAGGTGGGGG GGATTCTCTC TCCGGCAGGA TTACGGGAGA TATACCATAT CCTAAATTCC
TCCCGCCAGG TTCAAAAACT ATTTGCCGCT GGAAAATATC CTCGTTTATT TTATTTGTCG
TCGAAGATAG CGGAAGTAAA GGGTTTGGAG AATGAGATAA ATAATGCTGT AAGTGAAGAG
GCTGAACTTA AAGATGATGC CTCGCCGGAA TTGAAAAGCC TGCGGGGACA GATAAATACT
CTGCGCTTGC GTATCCGTAA TTACCTGCAG GAATTCATTC GCTCACCCGA TACCCAGAAA
TGGCTACAGG ACAGTCTGGT TACGGAAAGG GAAGGGCGCT ATGTGGTGCC GATCCGGCAG
GAGTTCCGGC ATGAGGTGCG AGGTATTATT CACGATGAAT CTGCCAGTGG AGCCACCGTT
TTTATTGAAC CGGCAGCAGT AGTAGAGAAC AATAATCGTA TCCGGGCTCT GCAAAGAGAA
GAAAAAAGAG AAGTAGAAAG AATATTACGA AAGCTTAGTG AGGCAGTAGG GCAATATCGG
GTAGAAATAG CCGGAAATCA GGAAATACTC AGTGAATTTG ATTTTATCTA TGCCCGTGCC
CGCCTGGCTT ATCAAGGTGA TTACTATCGC CCGGAGATTA ACGCGAGAGG TATCCTGGAG
ATTAGCCGGG GACGGCATCC CCTGTTGGGT CAGGATGCGG TTCCCCTGGA TATTCGCCTG
GGAAGTGATT TTGATGTACT GGTAATTACC GGTCCCAATA CCGGGGGGAA AACGGTGGCC
TTAAAAACGG TGGGGCTTTT GACCCTCATG GCCTTGAGCG GGCTCTTCAT TCCAGCCCGG
GAAAACAGCC GGATTTCCGT TTTTAAGAAG CTTTTTGTGG ACATTGGAGA TGAACAGAGC
ATTGAGCAAT CCTTAAGCAC CTTTTCCTCG CATATGACCA ATATTATTGC CATATTAGAA
AAAGCCGATA AGGAATCGCT GGTTTTGATG GATGAAGTGG GGGCAGGTAC TGACCCGGCC
GAGGGAGCCG CTTTGGCCCG GGTAATATTG GAAGAGTTGA TGCGTAAATG CTCCCGCGTA
ATCCTGACCA CCCACCAGAG CGAATTAAAA TATTTTGCCT ATCAAAGAGA ACGGGTAAAA
AATGCTTCGG TGGAGTTTAA CCCGGTAAGC TTGCAGCCCA CCTATAAGTT GAGTATAGGA
ATGCCCGGAC AAAGTAATGC CCTGGAAATC GCCTCCCGCC TGGGTTTGAA GACTGAGTTA
GTGCAGCAGG CCCGGCAGTT GCTGCCTCGC CGGGAAATGG AAATAGGGAA TATGATTCGC
CACTTGAAAG AAAGCCAGAG CCAGGTGGAA AAATCCCAGC AAGAAGTGGA AAAACTGCTG
GCAGAACTAC GGGAGAATAA ACAGAGCCTG GAGCAGGATA GGGAAAGCTT TGAACAGGAA
AAGACGGAAG TAATGGAAAA ATCCCGTTTG GAGGCAGAGC GCTACCTCCG GGAAATAAAA
AGGGAAGCCA ATACGGCCAT TGAGGAATTT AAAGAACTGA TGAAGGAAAA AGAAAAACCG
CCCAAATGGC ACGAAGTGGA GCAAGCCCGG CAAAAGATCC GGCAAATTAA AGTGGACTTC
CCGGGTGAAA TAGAAAAAGA CTACGGGGTT AATCCGCCTA AAATCAAAGC GGGGGATTAT
GTTACTATTA GGAATATTAA GCAAAAGGGT TATGTAGTAG AAGGTCCCAA CAACCAGGGT
GAGGTGGTAG TTCAGGTAGG CATACTAAAG CTTAATGTAA ATCAGGAACA GTTAAGTCCC
AGCCAGGAAA AAGAAGAAAT AATAAGCCAT CGCCGCCATC AGGGTTTTCT GGAAAAGGCC
CGGACAATTT CCAAGGAGAT TGATGTGCGG GGTCAATTGG CCGAAGATGC CCTGTATATA
GTCGATAAAT ACCTGGAGGA TGCCAATCTC TTAGGCCTGG ATTCGGTGCG TATTATCCAT
GGTAAAGGCA CTGGAGCCCT GAGAACCGCA GTTCGCCATT ATCTGAAAGA CCACCGCTAT
GTTAAAAGTT ATCGCGATGG TCTCCGGGAA GAAGGCGGCC ATGGGGTTAC AGTTGTGGAG
TTCAATTAA
|
|---|
| Protein sequence | MIVDEKTLIK LEYNKIREKL QRLSSFAGGQ RKAEEMRPSS DIAVIIRRLD ETGEAMEAMR
FSEPAFLYGL KLVDSQLAKV KVGGILSPAG LREIYHILNS SRQVQKLFAA GKYPRLFYLS
SKIAEVKGLE NEINNAVSEE AELKDDASPE LKSLRGQINT LRLRIRNYLQ EFIRSPDTQK
WLQDSLVTER EGRYVVPIRQ EFRHEVRGII HDESASGATV FIEPAAVVEN NNRIRALQRE
EKREVERILR KLSEAVGQYR VEIAGNQEIL SEFDFIYARA RLAYQGDYYR PEINARGILE
ISRGRHPLLG QDAVPLDIRL GSDFDVLVIT GPNTGGKTVA LKTVGLLTLM ALSGLFIPAR
ENSRISVFKK LFVDIGDEQS IEQSLSTFSS HMTNIIAILE KADKESLVLM DEVGAGTDPA
EGAALARVIL EELMRKCSRV ILTTHQSELK YFAYQRERVK NASVEFNPVS LQPTYKLSIG
MPGQSNALEI ASRLGLKTEL VQQARQLLPR REMEIGNMIR HLKESQSQVE KSQQEVEKLL
AELRENKQSL EQDRESFEQE KTEVMEKSRL EAERYLREIK REANTAIEEF KELMKEKEKP
PKWHEVEQAR QKIRQIKVDF PGEIEKDYGV NPPKIKAGDY VTIRNIKQKG YVVEGPNNQG
EVVVQVGILK LNVNQEQLSP SQEKEEIISH RRHQGFLEKA RTISKEIDVR GQLAEDALYI
VDKYLEDANL LGLDSVRIIH GKGTGALRTA VRHYLKDHRY VKSYRDGLRE EGGHGVTVVE
FN
|
|---|
| |