Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1101 |
Symbol | |
ID | 4283636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1267172 |
End bp | 1268845 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638137971 |
Product | uridine kinase |
Protein accession | YP_753782 |
Protein GI | 114566628 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0572] Uridine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATTG CAAGAGCGGA GACAGCTGGG TTTGAAGTAA GGATTAAAGG AATAGGTTCC TATAATGTTC CGGAAGGAAC TAGCGTAGCC GAGTTAGTAA AGAAACTGGA GAAGAAATTA ATCTATCCGG TAATGGCAAT AATTATTGAC AATCGCTTGC GAGATTTGAA TTATCGCTTT ACCCGGTCCT GTGCTATAGA GTTGGTAGAT ATGAATAGTG AAATCGGAGT GAGGATTTAC CGTCGCAGTA TGAGCTTTCT GTTGATGAAG GCAGCGCGTG ATTTGTTTCC TGAACGGGTG CTGACGGTAA AACACTCTCT ATCCAATGGC TTGTTATGCG AGTTTTTAAA TGAGGACTCG CGGACAGAAG AGATTGAAGC CATCGAAAAA AGAATGCAGG AAATTGTTGA GGACAATCTA CCTATCAGGA GAATGCGGAT TAATAAAGAA AAAGCCCAGG AGATATTCCG GGAGCAGGGG GAGGAAGACA AAGTGAAACT CCTGGCTTAT CGGGATGTGG ATGAGGTCCA AGTATGCGAG CTTGATGGGT TTTACGAAAA CTTCTATATT TTTATGCTTC CCGAAACGGG AATGTTGAAA AAGTTTCGTT TGTTTGAATA TCCACCGGGA ATGATTTTAC AAACCCCGGA GTTGAGTGCT CCAAATTCAT TGCGGCCTTA TGTGGAGCAA AAAAAACTGG CCAGTATATT TCAGGAGGCC AAAAATTGGG CCGAGATGCT GGGAACTCCT CATGTGGCAG CTCTTGATGA TATTATTGAA CATGGAGATA TTAATGATAT AATCCGGGTT AATGAGGCTT TGCATGAAAA GAAGATTGCT TTTATAGCCG ACCAGATTTG CTGTGACGAG GATATCCGCC TGGTGCTGAT ATCAGGACCG TCCTCTTCCG GCAAGACCAC TTTTGCCCAG CGTTTGCTCA TACAGCTCCG GGTAAATGGG AAGAAGCCGG TAGTTCTGTC CCTGGACAAC TATTTTGTTG ATCGTGACTT GACACCTCGG GACGAGAATA ACGATTATGA TTTTGAAGCT TTGGAAGCCC TGAAAGTGGA TTTGTTCAAT GAGCATCTGG GACGGCTTAT CAAAGGGGAT GAAGTGGAAA TTCCCCTCTA TAGTTTTACC CGGGGTTCTT GCGAAGAGCG GGGTATCTCC ATGAAGGTGC CGACAGGGGA ACCTATAATT ATTGAGGGCA TCCATGGCCT GAATGAGCGC TTGACCTGGA GTATTCCGCC GGAACAAAAA TTTAAAATAT ATATCAGTGC TCTGACCCAG TTGAATATAG ATTACAGCAA CCGGATTCCC ACCACGGACA GCAGGTTGGT GCGAAGGATA GTTCGTGATG CCAGAACCCG AGGCTACAAT GCTTTGGACA CCATCAAGCG GTGGCCTTCG GTTAGGCGGG GAGAGGAAAG GAACATTTTT TCTTTTCAAG AAAATGCCGA TATTATGTTC AATTCCTCTC TGGTTTATGA ATTATCAGTA TTGAAGCCCT ATATTGAGCC TCTGCTGCGG CAGATTGGCC CGGAACACCC GGAACATGTG GTGGCCCGCT ATCTCCTGCA ATTTGCCAGC TATTTTAAAC CTATAGCACC GGATGCGGTC CCCGCCAATT CCATTCTCCG GGAATTTATC GGGGGAAGCT GTTTTAAAGT ATAG
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Protein sequence | MAIARAETAG FEVRIKGIGS YNVPEGTSVA ELVKKLEKKL IYPVMAIIID NRLRDLNYRF TRSCAIELVD MNSEIGVRIY RRSMSFLLMK AARDLFPERV LTVKHSLSNG LLCEFLNEDS RTEEIEAIEK RMQEIVEDNL PIRRMRINKE KAQEIFREQG EEDKVKLLAY RDVDEVQVCE LDGFYENFYI FMLPETGMLK KFRLFEYPPG MILQTPELSA PNSLRPYVEQ KKLASIFQEA KNWAEMLGTP HVAALDDIIE HGDINDIIRV NEALHEKKIA FIADQICCDE DIRLVLISGP SSSGKTTFAQ RLLIQLRVNG KKPVVLSLDN YFVDRDLTPR DENNDYDFEA LEALKVDLFN EHLGRLIKGD EVEIPLYSFT RGSCEERGIS MKVPTGEPII IEGIHGLNER LTWSIPPEQK FKIYISALTQ LNIDYSNRIP TTDSRLVRRI VRDARTRGYN ALDTIKRWPS VRRGEERNIF SFQENADIMF NSSLVYELSV LKPYIEPLLR QIGPEHPEHV VARYLLQFAS YFKPIAPDAV PANSILREFI GGSCFKV
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