Gene Swol_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1099 
Symbol 
ID4283634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp1265082 
End bp1266188 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content49% 
IMG OID638137969 
Productpoly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 
Protein accessionYP_753780 
Protein GI114566626 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID[TIGR01836] poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCACA TCTTCCAAGC GCACTCGCCT GGTGAAGCTG GCGAAATACT GCAACAAAAT 
TGGGAACACT GGCTGATGAC CACGGCCAGG TGGAGGGAGA TATTGACCTA TGATCCCCGA 
CCTGCTACTG GTTGTTCGCC TAAGGAAATT TTGTGGACCA AGAACAAAGC ACAACTTTAT 
CACTATCAGT GCAGTAGTGA GCGCCGCTAT CGCACCCCGG TATTAATGAT ATATGCTCTC 
ATTAACAGGC CTTATGTATT GGATCTGACC CCGGGATCCA GTCTGGTGGA GTATCTGGTA 
AACGAGGGTT TCGATGTATA CCTGCTGGAT TGGGGAGAAT TTGAATGGGA GGATCGGGAT 
ATAACCTATG CTGATCTGGT CTATGACTAT ATCGCCACGG CTGCCCGGAA GGTGGCGCGC 
AGTGCCGGTT CCAAAGAAAT AAGCATTATC GGTTACTGCA TGGGTGGAAC CATGTCTACA 
TTGTACGCGG CCCTTTTTGA CCGGCCGGTT TTAAAAAATC TGGTCTACCT GGCGGCTCCC 
ATCGATTTCA ACCGGGCCGG AACTTATGAT GTATGGCTTA AAGCCCCGGG TTATGACCCG 
GACCGTATAG CTGATACCAT GGAGCTGGTC CCCAAGTCTT TCATAGATTG GGGAACCAGG 
ATGCTGAATC CTTTGGCCAA TTATTGGGGC ACATATACTC GCTTGTGGAA GACTTTGGAG 
GAAGGAAAGT CGGTTCATTT TTGGAAGGTG CTTAACAAGT GGTCCAGTGA TAATATTAAT 
TTTCCTGGCG GTGCCTATCG CGACTGGATA AGGGACTTCT ATCAAGGTAA CAAGCTCATA 
AAAAATCAAG TGGTATTACG GGGAAAGAGA GTACAGTTGC AGCGCATCAA AGCTAATATC 
CTGGCTATGG TGGGTTTGCG GGATCATATC GTTATGCCGC ACCAGACCGC AGCTGCCTTA 
ACCTATCTGG GGGGTAATGA TAAAACCTAT ATGGAGTTCC CAGTAGGTCA CGGGGGATTG 
GTTTTGGGCG AAACTGCCCG CATGAGAGTT TTCCCGGAAA TAGCTTATTG GTTGGGAGAG 
CGTTCCGAGG AATTAAGCGA AGAGTAA
 
Protein sequence
MEHIFQAHSP GEAGEILQQN WEHWLMTTAR WREILTYDPR PATGCSPKEI LWTKNKAQLY 
HYQCSSERRY RTPVLMIYAL INRPYVLDLT PGSSLVEYLV NEGFDVYLLD WGEFEWEDRD 
ITYADLVYDY IATAARKVAR SAGSKEISII GYCMGGTMST LYAALFDRPV LKNLVYLAAP 
IDFNRAGTYD VWLKAPGYDP DRIADTMELV PKSFIDWGTR MLNPLANYWG TYTRLWKTLE 
EGKSVHFWKV LNKWSSDNIN FPGGAYRDWI RDFYQGNKLI KNQVVLRGKR VQLQRIKANI 
LAMVGLRDHI VMPHQTAAAL TYLGGNDKTY MEFPVGHGGL VLGETARMRV FPEIAYWLGE 
RSEELSEE