| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1095 |
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| Symbol | |
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| ID | 4282420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 1259731 |
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| End bp | 1261782 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638137965 |
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| Product | phenylalanine--tRNA ligase |
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| Protein accession | YP_753776 |
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| Protein GI | 114566622 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0227274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGTAT CCTTGAACTG GTTGAAAAAA TATGTAGATA TTGACTGGAG CCCGGAAGAG
TTGGCACAGC GCCTTACTAT GGCGGGAGTT GCCGTAGAGG GATGGCAGGA ACAAGGCGGT
GACACGGTTC TTGAACTGGA TTTGACTCCT AACCGGGGTG ATTGTTTGGG TTTGATAAAC
CTGGCCCGGG AAGTTTCCGC TCTGAACGGC CAGGAATTGA GAATTCCCGA AATACAGATT
AAGCCTGCAG CGGAGAAGGT TGAGGATTAC ATAAAGGTAG AAATTACTGC CCGTGACCTT
TGTCCTCGTT ATGCTGCCCG ACTGGTGAAG AATGTTAGTA TCAAGGAATC GCCGGAATGG
ATGCAAGAAG CCCTGATTAA TTCTGGTATC CGTCCCATAA ACAACATAGT GGACATTACC
AATTATGTGA TGCTCGAGAC CAACCAGCCA TTACATGCCT TTGACTATAA TCTCCTGGGG
GACGAGAAAA GAATACTGGT CAGGCGGGCT GGAGACGGCG AAAAGTTTAC TACCCTGGAC
GGAGTGGAAA GGGTACTGGA TGCGGAGATG CTGGTTATCA CTGACGGTCG CAAGGCAGTA
GCTCTCGCCG GTATTATGGG GGGAGCGAAT AGTGAGATCC AGGATGATAC TTGCGATGTT
TTGTTGGAAT CAGCCAATTT TCAAGATACC AGTATTCGCA AAACATCGAA AAGGCTGGGC
TTGAGAAGTG ATTCCTCAAT CCGTTTTGAA AAAGGAGCAG ATATTGAAGG ATTGATATAT
GCTTTAAATC GTGCTGCCGC TCTGATACAG GATTTAGCCG GGGGGCAGGT ACTGGAGGGG
ATATGTGACA TTTATCCTGA GCCCCGAACG CCAATAACGC TCACTTTGCG TCCGGAAAGG
GTTAATTACC TGCTGGGCAC CGATATAAAT CCAGATGAAA TAAAGCAATA CCTGCAAAGA
CTAAAATTTA ACCTTAAAGA GCAAGACAAG CAGTTTTTGG TTGATATTCC TTTCTATCGC
CCGGATATTC AAATGGAGGT AGATTTGATT GAAGAAGTAG CCCGGCTTTA TGGCTATGGT
AATATACCTG CTGGCCTGCC TGGAGGCGAA AGCAGTGGCG GATTAAATCC CTACCAAAAA
TTTCGCCAAA GGCTTAATGA GTTTATGGCT CAAAGTCTAT CTGAGGTAGT CAACTATAGT
TTTATCAACC CCAAGGATTT TGACCGGCTT CTTTTACCAG CAGACAGTCC ACTACGAAAT
GTAGTTAAGA TTGCCAATCC TCTTTCGGAA GAACAGAGTG TTATGCGCAG CTTGCTACTG
CCAGGATTAT TAGAGACGAT AAAACGGAAC CTGGCAAGAA AGAACCAGGA TCTGGCCTTT
TTTGAGATGG GGCAGGTCTT TATTCCAACC AACGAGCTTT TGCCTTTGGA GAAATTGTAC
CTGGGAGCCA TAGTAACCGG GAAAAGCGAG CCCAACTGGT TGAAACAGCA GGTGGAATTA
GATTTCTTCT TTTTGAAAGG GATAATGGAA GATCTGCTGC AAGAGCTGGG GATAAGTGAT
TATGAATTCA AGGAAACCCA AAATCCTTCC TATCATCCGG GAAGAACTGC ATCCCTTGAG
GTGAAGGGTC AGGAGATAGC GGTAATCGGG GAGCTTCATC CCCTGGTATT GGAAAACTAT
GATATCAAGG AAAGAGCTTC GGCCTTTGAA TTAGATGTAG AAAAGCTGTT CACTTTGCTG
GGTGCAGCCA GTAAAATGGA ATCCATCAGC CGCTACCCGG CAGTAGAAAG AGATATTGCT
ATACTCCTGG ATCAGGAAAT CAAAGCATCA CAGGTGTTAA GCGTTATTAA GGGGATGAAC
AATCCGTTGC TTTACGATCT CAAGCTTTTT GACCTGTATT CAGGAACCCA GGTGACAAAA
GGCCAAAAGA GCGTAGCTTT TAAAGCCATA TTCCAATCTG CTGAGAGAAC CCTGACCGAT
GCTGAAGTTA ACCACAGTAT GGATAGTATT CTGGAACAAC TGAAGAAGCA GCTAGGAGCT
GTTTTGAGAT AG
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| Protein sequence | MGVSLNWLKK YVDIDWSPEE LAQRLTMAGV AVEGWQEQGG DTVLELDLTP NRGDCLGLIN
LAREVSALNG QELRIPEIQI KPAAEKVEDY IKVEITARDL CPRYAARLVK NVSIKESPEW
MQEALINSGI RPINNIVDIT NYVMLETNQP LHAFDYNLLG DEKRILVRRA GDGEKFTTLD
GVERVLDAEM LVITDGRKAV ALAGIMGGAN SEIQDDTCDV LLESANFQDT SIRKTSKRLG
LRSDSSIRFE KGADIEGLIY ALNRAAALIQ DLAGGQVLEG ICDIYPEPRT PITLTLRPER
VNYLLGTDIN PDEIKQYLQR LKFNLKEQDK QFLVDIPFYR PDIQMEVDLI EEVARLYGYG
NIPAGLPGGE SSGGLNPYQK FRQRLNEFMA QSLSEVVNYS FINPKDFDRL LLPADSPLRN
VVKIANPLSE EQSVMRSLLL PGLLETIKRN LARKNQDLAF FEMGQVFIPT NELLPLEKLY
LGAIVTGKSE PNWLKQQVEL DFFFLKGIME DLLQELGISD YEFKETQNPS YHPGRTASLE
VKGQEIAVIG ELHPLVLENY DIKERASAFE LDVEKLFTLL GAASKMESIS RYPAVERDIA
ILLDQEIKAS QVLSVIKGMN NPLLYDLKLF DLYSGTQVTK GQKSVAFKAI FQSAERTLTD
AEVNHSMDSI LEQLKKQLGA VLR
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