Gene Swol_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1088 
Symbol 
ID4282413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand+ 
Start bp1253011 
End bp1253607 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content42% 
IMG OID638137958 
Producthypothetical protein 
Protein accessionYP_753769 
Protein GI114566615 
COG category[S] Function unknown 
COG ID[COG4399] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.047449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATGGC AAATAATTGC CATACCACTA ATCAGTGCTG GTATTGGTTA CATGACCAAT 
GTTGTAGCCA TTAGACTGCT GTTCTGGCCC AAAAAGCCCA TAAGAATAAT GTTTTTTGAA 
ATATATGGTC TTTTGCCGAA AAGACAGGCG GAAATCGCGG CTCAACTGGG ACAGTTGGTT 
GAGGAACAGC TTCTTTCCAT AGATGATTTA TTTGACCGTA TTGATACCCC GGAGACCTAT 
TCCCGGCTTA GTTCAGAACT CAGCCATATT GTCAGGGGAA AGCTTTATGC CCTGTTACCC 
CGCATAATAC CAGGCAAAGT CAGTGCCTTG ATTGTGGACA ACCTTGATCG CATTCTGCAA 
CAAGAAGCCC CGGCAATTTT TAAACAACTT CTGACTACGG GTCGAGACTA CCTTAATGAA 
GAAGTGCAAA TCAAGCAAAT AGTGGAGAAC CGGGTTATGG CACTGGATCT TGATGAATTG 
GAAATGATGA TTAGGGGAGT ATCCGGAACC GAGATAAGAT TTATTGAATT ACTGGGTGGC 
ATCCTGGGCT TTATTATCGG TCTGGTTCAA TTGTTTATAA TATCCTTAAC TACTTGA
 
Protein sequence
MIWQIIAIPL ISAGIGYMTN VVAIRLLFWP KKPIRIMFFE IYGLLPKRQA EIAAQLGQLV 
EEQLLSIDDL FDRIDTPETY SRLSSELSHI VRGKLYALLP RIIPGKVSAL IVDNLDRILQ 
QEAPAIFKQL LTTGRDYLNE EVQIKQIVEN RVMALDLDEL EMMIRGVSGT EIRFIELLGG 
ILGFIIGLVQ LFIISLTT