| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1087 |
|---|
| Symbol | |
|---|
| ID | 4282412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1251838 |
|---|
| End bp | 1252767 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638137957 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_753768 |
|---|
| Protein GI | 114566614 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02834] putative sporulation protein YtxC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.191663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATG GGTTTCGAAT AGTAACAGAC AGCGAAATTG ATAACTTATT AATAAAGCTT
GAAGAACGGC TAAAGTGGAT TAAGCAGAAG GATTTTTCTT TTCAAGTTCA GAGCAGCTAT
AAAATGGAGC ATTCAACATA TATAGTCGAT ATATATTTGG AAGGGAATAA AAGGGATAAA
TTGTTCCGGG ATGAAGATAT CATTCATATA TTTAAACACC AAATTGCCGA GGTTTTGGCC
GAACATATAG TTTACGAATG GGAATCAAAA CTGCTTTGGA AGGCTATTAA CCGAAAGTAC
CGCTCAGCAT TAAGAGAAGA TAAAACAATT ATTCATAATA AAGCCAGTGA ATTTCTGTGC
AAGTGTCACT ATAATGAAAG CCTGAATCTC TTGATGGCTT ATGGTCGCAA AAATCGCATT
GCTCACCGTT TGTTTGACCA GATTGAAAAT CATAAAACTT TAGTTATAGA AGGTTTTATT
AATTTTTGCC TGCCGGAATA TTTGGCAGAA ATCAGATTTG CCGTGGAACT GGCCAGTGAA
GAGTTGAAAA GCGAAAAGGA GTATAATGAA TTTGTTAAAC TCCTGCGTTA TTTTGTGGAA
ACCCAGATGC CCAGAGTGCT GGAAGTAAAT CTAATAATTA CCGATAAAGG TAGATTCTAC
CTATGGGATG AGAACGGGAT AAAGATTGAG GACAAATATA TAAACTACTA TCTGGACGAT
ATCTTGCAAA ATGAGATTAG TCTTGATGAT GTGCTAATAA GTATACTGGT TACCATTGCA
CCTCGCAAGA TTATACTACA CAATACTGAT GAGCTTTCTT GCAATGAACC GGTAAAGATG
ATTAAGAATG TTTTTCAAGA AAGAATTATT ACTTGTCCGG GTTGTAAATA TTGCCGACAT
GATGAAAAAA ATTTGGTGCC AGGCACTTAA
|
|---|
| Protein sequence | MNYGFRIVTD SEIDNLLIKL EERLKWIKQK DFSFQVQSSY KMEHSTYIVD IYLEGNKRDK
LFRDEDIIHI FKHQIAEVLA EHIVYEWESK LLWKAINRKY RSALREDKTI IHNKASEFLC
KCHYNESLNL LMAYGRKNRI AHRLFDQIEN HKTLVIEGFI NFCLPEYLAE IRFAVELASE
ELKSEKEYNE FVKLLRYFVE TQMPRVLEVN LIITDKGRFY LWDENGIKIE DKYINYYLDD
ILQNEISLDD VLISILVTIA PRKIILHNTD ELSCNEPVKM IKNVFQERII TCPGCKYCRH
DEKNLVPGT
|
|---|
| |