Gene Swol_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1033 
Symbol 
ID4281679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1174658 
End bp1175419 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content43% 
IMG OID638137906 
ProductSir2 family regulatory protein 
Protein accessionYP_753718 
Protein GI114566564 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAA ACATTGACCG TGTTGTGGAG ATTCTTGATC GATCCCATAA CACAGTTGTG 
GTGACGGGTG CTGGTATTAG CACGGAGGCA GGTATTCCTG ACTTTCGTGG ACCAGAGGGA
ATTTACCGGA AACTCGGAGA AAACCGGGTA ATGAAGATTA TTAACATAGA TTTCTTTCGC
AATAATCCCT TGGAATTTTA TAAGTTTTAC CGGCAGTACT TCATCTTTCC TCCGGTGGAA
CCAGGCAAAG CACATCAGGT GCTGGCAGAA ATGGAAAAGG CAGGCATCAT TAAGGCTATA
GTCACCCAGA ACATCGACAA CCTTCATCAA AAGGCCGGGA GTCAAAAAGT AATACCTATT
CACGGCAATG GTGCTCGTTT TTTATGTCAG GAACGTAATT GCCGCTCAGT ACATGACAGT
AATTATGTTA ATACTTACCC GGAGGTTATT CCCCGTTGTT CTCAATGCGG AGGCATCCTG
AAACCAGATG TAGTTCTTTT TGGAGAACAT ATTAAAAATT ACCCGGACGC TATGGATAGA
ATACTAGGAG CCAGGGTTTT GGTCGTAATT GGTTCTTCCT TGACCGTCTA CCCATTGGCC
GGTTTTGTTA AAGAATTCAG CACCTTTACC CAGTATCTGA TAATTATTAA TAAAGGTCCT
ACCCCGCTTG ATCATGCAGC AGTAGTTAAA TTGCAGGAGG GAAATACCGG TGAGCTGCTT
GAGGAAATAT TTGAAAAGAT AAAAAAGCGG AGAAAGCAGT AG
 
Protein sequence
MEKNIDRVVE ILDRSHNTVV VTGAGISTEA GIPDFRGPEG IYRKLGENRV MKIINIDFFR 
NNPLEFYKFY RQYFIFPPVE PGKAHQVLAE MEKAGIIKAI VTQNIDNLHQ KAGSQKVIPI
HGNGARFLCQ ERNCRSVHDS NYVNTYPEVI PRCSQCGGIL KPDVVLFGEH IKNYPDAMDR
ILGARVLVVI GSSLTVYPLA GFVKEFSTFT QYLIIINKGP TPLDHAAVVK LQEGNTGELL
EEIFEKIKKR RKQ