Gene Swol_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1016 
Symbol 
ID4281735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1155351 
End bp1157105 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content42% 
IMG OID638137889 
Productmagnesium-protoporphyrin IX monomethyl ester oxidative cyclase 
Protein accessionYP_753701 
Protein GI114566547 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTT TATTAACCAC CCTTAATGCC AAATACATTC ATTCAAATCT GGCCCTGGCC 
TATCTTCAAG CGACTGTTGT TGATGACAGC TGGGAGACTA AAGTACGCGA GTTTACCATA
AACGAAAAGA ACGAGTACAT TATGGCGGAG ATATTTCGCG AGCAGACGGA TGTGCTCGCT
TTTTCCGTTT ATATATGGAA TGTTGGTGCT ATCTTGGAAA TCTGTCGCGA ATATAAGAAG
GTAGCTCCAC AAAGCTATAT TATCCTGGGA GGACCGGAAG TAAGTTATGA TGCTAGAAAT
ATTTTAATGG AAAATCCTAG CATTGATTGC ATAATACGCG GGGAAGGGGA GGAAAGCTTA
AAGGAAGTCC TGGAGAGTAT TGCTGGAAAC AAATCCCGCA CAGCAATAAA GGGGATAAGC
TACCGAGATG GGTCATCAAT TATCGATAAT CCCGATAGGG AACTGATAGC TGACCTGGAT
ATTATTCCTT TTCCTTATGA CCAACTAGAT TCTTACCATA ATCGTATTTT GTATTACGAG
ACTTCCCGGG GTTGCCCTTA TAACTGCAGT TACTGCCTAT CCTCAACCAT CAAGGGGGTG
CGCTTTTTCC CTCTGGAGAG GGTAAAAAAG GATCTGGCTA AATTAATTAA CGCTGGGGTA
AGGGAAGTAA AATTTGTTGA CCGGACTTTC AATGCCGATG AAAGACGAGC CCGGGAAATC
ATGGAGTTTA TTATTTCCCA ACAGGGAAAT ACCCGCTTTC ATTGTGAGAT AACCGCGGAA
TATCTATCCC CGGAATTCAT CTCCTTCCTG GCTACCGTAC CACCAGACTT ATTTAATTTT
GAAATCGGTA TTCAGTCTAC TTGCCCAGAA AGCCTTAAGG CTGTAAGAAG GAAAAGCAAT
TGGACACACT TGAGGACTAA TATTGAAAGG CTGCAAGCTG CCAGCAATAT CCACCTGCAT
CTCGATCTTA TTGCTGGTCT GCCTTATGAA AGTTATAAGC GCTTTGCCCG CTCTTTCAAT
GATGTTTTCT CTTTACTTCC GGATGTAATC CAGTTGGGTT TCCTCAAGCT CTTGAAAGGT
TCGGAAATAC GGGCTGCTGC AAGAGAACAT GGATATCTGT TTCAGGATAA TCCCCCTTAC
CAACTGCTGG CCAATCATTA TCTCGATTAC AATGAAATCT TACAGTTGAA ACAAATAGAG
GACTTGCTGG AGCGTTATTA CAATTCGGGC AAGATGCGCT TTACGCTGGA CTATATCGTA
AAGCAGATCT ATCAGGGTGA TGCTTTTAGT TTCCTGGCTG CTTTCGCCTC TTATTGGCAG
GAACAGGGGT ACTTTGCCTG CTCTCATCGC CAGGAAGCGG AATATAATTT TTTGCTGGAT
TTTGTTAAGA GCAATTTTGT TGAGTTTCAG GAAATAGTCA ATGAACTGCT AAAATACGAT
TATCTCTGGA ATCAGCAATC ATCTAATCTA CCCTCTAAAC TGAGCAGGTA TAACCCGGAA
AACACGAGCC AAATACTCTA CACATTGATA AAAGATCAGG ATTTTGTGCA GTCAAATCTA
CCCTCCTATG CCAGCACAAA AAGCAACCGG GAATTGCGCA GGCTGCTACA TCTTGAGTTT
TTTAGAATCG ACCTCATTAC TGGAATACCA TCTTCCCGGC TTATCCCTTA TCTTTTTCTC
TATAATCCCC GCCGTAAAAA AGCAGAAGAG TTGATAAAGG TGCCAGGCAC CTTTATCAAC
TCTGAGTTAA ACTAA
 
Protein sequence
MKLLLTTLNA KYIHSNLALA YLQATVVDDS WETKVREFTI NEKNEYIMAE IFREQTDVLA 
FSVYIWNVGA ILEICREYKK VAPQSYIILG GPEVSYDARN ILMENPSIDC IIRGEGEESL
KEVLESIAGN KSRTAIKGIS YRDGSSIIDN PDRELIADLD IIPFPYDQLD SYHNRILYYE
TSRGCPYNCS YCLSSTIKGV RFFPLERVKK DLAKLINAGV REVKFVDRTF NADERRAREI
MEFIISQQGN TRFHCEITAE YLSPEFISFL ATVPPDLFNF EIGIQSTCPE SLKAVRRKSN
WTHLRTNIER LQAASNIHLH LDLIAGLPYE SYKRFARSFN DVFSLLPDVI QLGFLKLLKG
SEIRAAAREH GYLFQDNPPY QLLANHYLDY NEILQLKQIE DLLERYYNSG KMRFTLDYIV
KQIYQGDAFS FLAAFASYWQ EQGYFACSHR QEAEYNFLLD FVKSNFVEFQ EIVNELLKYD
YLWNQQSSNL PSKLSRYNPE NTSQILYTLI KDQDFVQSNL PSYASTKSNR ELRRLLHLEF
FRIDLITGIP SSRLIPYLFL YNPRRKKAEE LIKVPGTFIN SELN