Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1016 |
Symbol | |
ID | 4281735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1155351 |
End bp | 1157105 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638137889 |
Product | magnesium-protoporphyrin IX monomethyl ester oxidative cyclase |
Protein accession | YP_753701 |
Protein GI | 114566547 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTTT TATTAACCAC CCTTAATGCC AAATACATTC ATTCAAATCT GGCCCTGGCC TATCTTCAAG CGACTGTTGT TGATGACAGC TGGGAGACTA AAGTACGCGA GTTTACCATA AACGAAAAGA ACGAGTACAT TATGGCGGAG ATATTTCGCG AGCAGACGGA TGTGCTCGCT TTTTCCGTTT ATATATGGAA TGTTGGTGCT ATCTTGGAAA TCTGTCGCGA ATATAAGAAG GTAGCTCCAC AAAGCTATAT TATCCTGGGA GGACCGGAAG TAAGTTATGA TGCTAGAAAT ATTTTAATGG AAAATCCTAG CATTGATTGC ATAATACGCG GGGAAGGGGA GGAAAGCTTA AAGGAAGTCC TGGAGAGTAT TGCTGGAAAC AAATCCCGCA CAGCAATAAA GGGGATAAGC TACCGAGATG GGTCATCAAT TATCGATAAT CCCGATAGGG AACTGATAGC TGACCTGGAT ATTATTCCTT TTCCTTATGA CCAACTAGAT TCTTACCATA ATCGTATTTT GTATTACGAG ACTTCCCGGG GTTGCCCTTA TAACTGCAGT TACTGCCTAT CCTCAACCAT CAAGGGGGTG CGCTTTTTCC CTCTGGAGAG GGTAAAAAAG GATCTGGCTA AATTAATTAA CGCTGGGGTA AGGGAAGTAA AATTTGTTGA CCGGACTTTC AATGCCGATG AAAGACGAGC CCGGGAAATC ATGGAGTTTA TTATTTCCCA ACAGGGAAAT ACCCGCTTTC ATTGTGAGAT AACCGCGGAA TATCTATCCC CGGAATTCAT CTCCTTCCTG GCTACCGTAC CACCAGACTT ATTTAATTTT GAAATCGGTA TTCAGTCTAC TTGCCCAGAA AGCCTTAAGG CTGTAAGAAG GAAAAGCAAT TGGACACACT TGAGGACTAA TATTGAAAGG CTGCAAGCTG CCAGCAATAT CCACCTGCAT CTCGATCTTA TTGCTGGTCT GCCTTATGAA AGTTATAAGC GCTTTGCCCG CTCTTTCAAT GATGTTTTCT CTTTACTTCC GGATGTAATC CAGTTGGGTT TCCTCAAGCT CTTGAAAGGT TCGGAAATAC GGGCTGCTGC AAGAGAACAT GGATATCTGT TTCAGGATAA TCCCCCTTAC CAACTGCTGG CCAATCATTA TCTCGATTAC AATGAAATCT TACAGTTGAA ACAAATAGAG GACTTGCTGG AGCGTTATTA CAATTCGGGC AAGATGCGCT TTACGCTGGA CTATATCGTA AAGCAGATCT ATCAGGGTGA TGCTTTTAGT TTCCTGGCTG CTTTCGCCTC TTATTGGCAG GAACAGGGGT ACTTTGCCTG CTCTCATCGC CAGGAAGCGG AATATAATTT TTTGCTGGAT TTTGTTAAGA GCAATTTTGT TGAGTTTCAG GAAATAGTCA ATGAACTGCT AAAATACGAT TATCTCTGGA ATCAGCAATC ATCTAATCTA CCCTCTAAAC TGAGCAGGTA TAACCCGGAA AACACGAGCC AAATACTCTA CACATTGATA AAAGATCAGG ATTTTGTGCA GTCAAATCTA CCCTCCTATG CCAGCACAAA AAGCAACCGG GAATTGCGCA GGCTGCTACA TCTTGAGTTT TTTAGAATCG ACCTCATTAC TGGAATACCA TCTTCCCGGC TTATCCCTTA TCTTTTTCTC TATAATCCCC GCCGTAAAAA AGCAGAAGAG TTGATAAAGG TGCCAGGCAC CTTTATCAAC TCTGAGTTAA ACTAA
|
Protein sequence | MKLLLTTLNA KYIHSNLALA YLQATVVDDS WETKVREFTI NEKNEYIMAE IFREQTDVLA FSVYIWNVGA ILEICREYKK VAPQSYIILG GPEVSYDARN ILMENPSIDC IIRGEGEESL KEVLESIAGN KSRTAIKGIS YRDGSSIIDN PDRELIADLD IIPFPYDQLD SYHNRILYYE TSRGCPYNCS YCLSSTIKGV RFFPLERVKK DLAKLINAGV REVKFVDRTF NADERRAREI MEFIISQQGN TRFHCEITAE YLSPEFISFL ATVPPDLFNF EIGIQSTCPE SLKAVRRKSN WTHLRTNIER LQAASNIHLH LDLIAGLPYE SYKRFARSFN DVFSLLPDVI QLGFLKLLKG SEIRAAAREH GYLFQDNPPY QLLANHYLDY NEILQLKQIE DLLERYYNSG KMRFTLDYIV KQIYQGDAFS FLAAFASYWQ EQGYFACSHR QEAEYNFLLD FVKSNFVEFQ EIVNELLKYD YLWNQQSSNL PSKLSRYNPE NTSQILYTLI KDQDFVQSNL PSYASTKSNR ELRRLLHLEF FRIDLITGIP SSRLIPYLFL YNPRRKKAEE LIKVPGTFIN SELN
|
| |