Gene Swol_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0952 
Symbol 
ID4282204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1079516 
End bp1080556 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content45% 
IMG OID638137826 
Productsensory box histidine kinase 
Protein accessionYP_753638 
Protein GI114566484 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000116101 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATTG CCCAGGAGAA GAGAATGATG CAGTCCATTT TGAGCTGTAT GGTTGATGGG 
GTACTGGTAC TTAATATTGA TGGGTGCATT ATTCAGGCCA ACAAGGCAGC AGAAAGCCTG
TTTCTGGTAC GCGAGGGTGT ATTGTTGGGG AAGCGTTTAA CCCAGATAAG CGAAAACCGG
GAAATCAGCG ATATGATTGA CGAAGTACTG ACAACCGGGA ATGAAAGCTT TACTGAAACT
ACTATCAGCC CCAGTACCTT AGTTTTTCGG GTTCATGCTG TTCCCAGGAA GGATCACCAT
GAGAGAATTG AAGGTGCTAT CGTAGTATTC CATGATGTTA CCGATGCCCG CAATTTTGAC
CAGATTAGAT CGGCTTTTGT GGGTAATGTG TCCCACGAAC TCAGAACCCC TTTGACTTCT
ATTAAAGGTT TTGTGGAAAC GCTTTTGGAT GGTGCCATGG AAAACAGTGA TACCTGCAGG
CGTTTTCTAT CTATTATTGA TACCGAAACC AACCGCTTGA CCCGTCTGAT TGAGGATCTC
TTAACCTTAT CCTCAATTGA ATCCCAGGAA CGCATAGTAT ATTTGAAACC GGCTTGCCTT
TTGCGTTCTA TTCGCAATGT AATGAATATG TTTGGACCAC AGATTAGTGA AAAAAGCCTG
CATGTTGAAT TTATACACCC CTATCCCATG CCACTGATTC AAGCTGATGA GGATTTGCTG
GGCCAGGTAT TTATCAATCT TCTGGATAAT GCCATAAAAT ATACTCCCCG ACAGGGAAAA
ATCGTAATCC AATGCCAACG GCGGGACAGC CGTATTATCA CAACCGTAAA GGATAGCGGC
ATGGGGATTC CTCACGAGAG TTTGCCCCGG GTTTTCGAAC GATTCTACCG GGTTGACAAA
GCTCGCTCCC GACAGCAAGG GGGAACCGGT TTAGGTTTAT CCATAGTCAA ACATATTGTG
GAATCCCATG GAGGAGAGGT GTTTGTGGAT AGTGAGATTG GCAAGGGCTC CACTTTTGGG
GTAAGCTTCC TGGTAATCTA G
 
Protein sequence
MDIAQEKRMM QSILSCMVDG VLVLNIDGCI IQANKAAESL FLVREGVLLG KRLTQISENR 
EISDMIDEVL TTGNESFTET TISPSTLVFR VHAVPRKDHH ERIEGAIVVF HDVTDARNFD
QIRSAFVGNV SHELRTPLTS IKGFVETLLD GAMENSDTCR RFLSIIDTET NRLTRLIEDL
LTLSSIESQE RIVYLKPACL LRSIRNVMNM FGPQISEKSL HVEFIHPYPM PLIQADEDLL
GQVFINLLDN AIKYTPRQGK IVIQCQRRDS RIITTVKDSG MGIPHESLPR VFERFYRVDK
ARSRQQGGTG LGLSIVKHIV ESHGGEVFVD SEIGKGSTFG VSFLVI