Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0929 |
Symbol | |
ID | 4282871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1049864 |
End bp | 1050622 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638137795 |
Product | putative hydrolase |
Protein accession | YP_753616 |
Protein GI | 114566462 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.119531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGAAAACC TCAGAATAAG AAAATATGAT GGTCAAGAAC TGGCTGCCCT GGCTTTTGTC CCCGTGGAGC CAATTATGGT ATTGCTGGTA TCTCACGGTT TTCGCGGAGC TAAGGAAAAC GGGGGTAAGA TTTACTCTTT TGCTTCCCGC CTGCAGGAAC TAGGGATAGC AGTGTACGCC TTTGATTTTA TAGGCAGCGG GGCCAGTGAC GGCAGTTTTG CTGATATAAC TCTCTCTCGC CAGGGCGATG ATCTGGCGGT TGTAATGGAT TATGCCTATA ACAGACACCA ACTCCCCCTG CTATTATTAG GGAGGAGTTT TGGGGGCAGT ACGGTTCTGG CCGGGGGGAG CAAAGACCAG AGGGTAGCTG GCTTCATACT CTGGTCTACC CCGGTGATGT TAAAGGATTG CTTTGCTCGT ATTATGGGCT CTGATTATAA TAAACTGAAA GAAGGGCAGG CCTTACGCTT TCAGGATGAA GCCGGGGAAT TTGCATTAAA TCCTGGTTTT ATAAAAGATT TCGACTTGCA TGATATGGAT CAATACCTGG CCACAATTGC CTCCCGGCCA GTTCTTATAG TACATGGAAA AGAGGATGAG GCAGTAGACT TTACTAATGC AGAGTACGCA GCCCGCCAGC TCCCTAATTC TCAGTTATAT CTGGTAGATC AGGCTGACCA CCGCTTTACC GGGATGACGA GAGAAAGGGA AGACATAACC ATCAACTGGC TTCGCGAAAC ATTCCCCCAC TTATCTTGA
|
Protein sequence | MENLRIRKYD GQELAALAFV PVEPIMVLLV SHGFRGAKEN GGKIYSFASR LQELGIAVYA FDFIGSGASD GSFADITLSR QGDDLAVVMD YAYNRHQLPL LLLGRSFGGS TVLAGGSKDQ RVAGFILWST PVMLKDCFAR IMGSDYNKLK EGQALRFQDE AGEFALNPGF IKDFDLHDMD QYLATIASRP VLIVHGKEDE AVDFTNAEYA ARQLPNSQLY LVDQADHRFT GMTREREDIT INWLRETFPH LS
|
| |