Gene Swol_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0929 
Symbol 
ID4282871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1049864 
End bp1050622 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content48% 
IMG OID638137795 
Productputative hydrolase 
Protein accessionYP_753616 
Protein GI114566462 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.119531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAAACC TCAGAATAAG AAAATATGAT GGTCAAGAAC TGGCTGCCCT GGCTTTTGTC 
CCCGTGGAGC CAATTATGGT ATTGCTGGTA TCTCACGGTT TTCGCGGAGC TAAGGAAAAC
GGGGGTAAGA TTTACTCTTT TGCTTCCCGC CTGCAGGAAC TAGGGATAGC AGTGTACGCC
TTTGATTTTA TAGGCAGCGG GGCCAGTGAC GGCAGTTTTG CTGATATAAC TCTCTCTCGC
CAGGGCGATG ATCTGGCGGT TGTAATGGAT TATGCCTATA ACAGACACCA ACTCCCCCTG
CTATTATTAG GGAGGAGTTT TGGGGGCAGT ACGGTTCTGG CCGGGGGGAG CAAAGACCAG
AGGGTAGCTG GCTTCATACT CTGGTCTACC CCGGTGATGT TAAAGGATTG CTTTGCTCGT
ATTATGGGCT CTGATTATAA TAAACTGAAA GAAGGGCAGG CCTTACGCTT TCAGGATGAA
GCCGGGGAAT TTGCATTAAA TCCTGGTTTT ATAAAAGATT TCGACTTGCA TGATATGGAT
CAATACCTGG CCACAATTGC CTCCCGGCCA GTTCTTATAG TACATGGAAA AGAGGATGAG
GCAGTAGACT TTACTAATGC AGAGTACGCA GCCCGCCAGC TCCCTAATTC TCAGTTATAT
CTGGTAGATC AGGCTGACCA CCGCTTTACC GGGATGACGA GAGAAAGGGA AGACATAACC
ATCAACTGGC TTCGCGAAAC ATTCCCCCAC TTATCTTGA
 
Protein sequence
MENLRIRKYD GQELAALAFV PVEPIMVLLV SHGFRGAKEN GGKIYSFASR LQELGIAVYA 
FDFIGSGASD GSFADITLSR QGDDLAVVMD YAYNRHQLPL LLLGRSFGGS TVLAGGSKDQ
RVAGFILWST PVMLKDCFAR IMGSDYNKLK EGQALRFQDE AGEFALNPGF IKDFDLHDMD
QYLATIASRP VLIVHGKEDE AVDFTNAEYA ARQLPNSQLY LVDQADHRFT GMTREREDIT
INWLRETFPH LS