| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0908 |
|---|
| Symbol | |
|---|
| ID | 4281131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1028586 |
|---|
| End bp | 1029293 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638137774 |
|---|
| Product | xylanase/chitin deacetylase |
|---|
| Protein accession | YP_753595 |
|---|
| Protein GI | 114566441 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | [TIGR02873] probable sporulation protein, polysaccharide deacetylase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATGT CCATTTTGCT GCTGGGCGTA TTCACCACAA TCTTACTTAT GCGCGGGGAT
GACAGCAGTG TAGCTTCCAG GGTGCTTGAT CCCATATATC AGGGCAACAG CGGAGAGAAA
GCGGTGGGCA TAACCGTCAA TGTGGATTGG GGTGAGGAAT ATATCCCTCA GATGCTCAAA
AGTTTTAAAG AAAACCAGGC TGAGGTCACC TTCTTTGTTA GCGGAAAGTG GGCAGAAAAA
AATCCGGAGC TTTTAAAAGA AATGAAAGCT GCCGGACATA GTATCCAGAG CCATGGATAC
AAACATTTGC ATTTTAATAA TATCTCAGCG GAAGAAGCCA GTGAGCAAAT AAGAAAAGCC
GAGGAGATTA TTAATAAGAC CGTAGGTGAA AAACCCCGGT TTTTTGCTCC CCCTTATGGG
GAATATAACC AGCAATTGCT GAATGTGGTC GCTGCTTTGG ATTATGAGCT TATTATGTGG
AGCATTGATA CGATAGATTG GCAGCGCCCT GATCCGGCAA CCATTGTTAA AAGAGTCAGC
AACAAGTTGC ATAACGACGC CATTATCTTG ATGCACCCTA CAGACCCCAC CGTTAAAGCT
CTTCCTGCCA TCTTGGAGAA AATTAAGCAA GACGGTTATA AAATGCTTAC TATCGATAAA
ATTATCAAGC AGAGTAAAGG AGATAATAGT AAAGGAGATA ATAATTGA
|
|---|
| Protein sequence | MLMSILLLGV FTTILLMRGD DSSVASRVLD PIYQGNSGEK AVGITVNVDW GEEYIPQMLK
SFKENQAEVT FFVSGKWAEK NPELLKEMKA AGHSIQSHGY KHLHFNNISA EEASEQIRKA
EEIINKTVGE KPRFFAPPYG EYNQQLLNVV AALDYELIMW SIDTIDWQRP DPATIVKRVS
NKLHNDAIIL MHPTDPTVKA LPAILEKIKQ DGYKMLTIDK IIKQSKGDNS KGDNN
|
|---|
| |