| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0906 |
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| Symbol | |
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| ID | 4282073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 1025311 |
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| End bp | 1027422 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638137772 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_753593 |
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| Protein GI | 114566439 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.80141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATAGTTA AGAAGTATCA AATGGAGGTA GCAGGGCGAC CATTAATTGT GGAAATAGGA
CAAGTTGCCC AGCAGGCCAA TGGAGCTGCT CTTATGAGAT ATGGCGATAC AGTTGTATTG
GTCACAGCTA CAGCTGCCAA ACAGCCCCGC GAAGGAATTG ACTTTTTCCC GCTAACGGTT
GATTACGAGG AGAAACAATA TGCGGTAGGG AAAATACCAG GAGGTTTCAT TAAAAGAGAA
GGCCGGGCTA CAGCCCAGGC TACCCTATCT GCTCGCTTGA TTGACCGGCC TATCCGCCCA
CTTTTCCCTA AAGGTTTCCG GAATGAAATA CATGTAGTAG CCACTATTCT ATCGGTGGAG
AAAGATAATG CACCAGATGT TACCGCTATA ACCGGAGCCT CTGTTGCCCT TTCTATTTCT
GATATACCTT TTGCTGGTCC AGTAGCGGCA GTAATAGTGG GACTGGTGGA TGGGGAACTG
ATTATTAATC CTACAGTGGA GCAACACCAG AAAAGCGATC TACACCTGGC GGTAGCGGGA
ACCAAAGAGG CTATCATGAT GGTTGAAGGA GGAGCCAATG AGGTTCCTGA GGAAACTATG
CGTGATGCTA TTTTCTTTGC TCATGAAGAG ATTAAGAAAA TAGTAGATTT TCAGGAAAAT
ATCATAAGAG AAGTTGGCCT GTCCAAAATG CAGGTGGAAA TTCCGATTTT GGATGAGGAA
ATAAAAAAGG CCGTTGTCGA ATTTGCTACT CCACTATTTG AAGAAGCGGT CAAGAATCCA
GATAAGAAGA CGAGGGAAGA CCAGATGGAT TCCTCCCAGA AATCTGTTTT GCAGCACTTT
ACCGAGAGCT ATCCGGAAGA AGAAAAATTG ATTGCCGATG TATCGGACGA GACCATGAAA
GCCGTGGTTA GAAAGATGGC TCTGGAGGAA GGGGAACGGG TTGATGGGAG AAAGCTTGAT
GAAATCAGGA AAGTAAGCTG CGAGGTTGGT TTCCTGCCCC GGCCTCATGG CTCAGGTCTT
TTTACCCGCG GTCAGACCCA GGTTTTGTCG GTTACCACCC TGGGAGCCAT CAGTGAAGAA
CAACGGCTTG ATGGTCTGGG AATCGAAGAG AAAAAAAGAT ATATTCATCA CTATAATTTC
CCTCCCTATA GCACTGGTGA AACCAAACCT ATGCGTGGTC CGGGAAGAAG GGAAATTGGT
CACGGAGCCC TGGCTGAACG GGCTTTGCTG GCAGTAATAC CATCGGAAGA AGAATTCCCT
TATACTATAA GGGTAGTTTC TGAAGTTTTG GAATCAAATG GCTCCAGCTC TATGGGGAGT
GTATGTGGTA GTACGCTATC TCTGATGCAC GCCGGTGTTC CCATTAAAGC TCCGGTATCT
GGTATTGCCA TGGGACTGGT CAAAGAAGGC GAGCGTTTTG CCATTATGAG TGATATTCAG
GGAATAGAGG ATGCTCTAGG AGACATGGAT TTCAAACTGG CTGGAACCGA AAAAGGGGTT
ACCGCCCTGC AGATGGACAT AAAAATTACC GGGGTTAACC GTGAAATAGT CGAAGCTGCA
CTTAAACAGG CCCGTGAAGG CAGAATGTTT ATCTTAAAGA AGATGCTCGA AGCCATCGAT
AAGCCTAATG AGGAACTTTC TCCTTATGCC CCGCAGATGA TCCGTATGCA GATAGACCCG
GACAAAATCC GGGAAGTTAT TGGACCTGGC GGCAAAACCA TTCATAAAAT AGTCGATGAG
ACCGGTTGCA AAATTGATAT TGAAGATGAT GGTAGCCTGT TTATAATGGC TACAGATGAA
GAGGCCGCGA AAAAGGCCCG ATTTTTTGTG GAATCCATTG TGGCTGAAGT TGAGGTGGGC
AAGACCTACA TGGGAACCGT TAAGCGCATA ATGGATTTTG GGGCTTTTGT GGAAATCATT
CCCGGGGTAT TGGGAACATC AGGAAAAGAA GGCCTGGTAC ACATTTCCCA GCTGGCCGAG
GAAAGAGTAA ACAAAGTCAG AGATGTGGTG GACATCGGGG ATCAGATACT GGTCAAGGTT
ACAGAAATTG ATAGACAAGG CCGGGTAAAC CTTTCCCGTA AAGCTGTATT AAAAAGCGCT
GTTAAAAAAT AA
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| Protein sequence | MIVKKYQMEV AGRPLIVEIG QVAQQANGAA LMRYGDTVVL VTATAAKQPR EGIDFFPLTV
DYEEKQYAVG KIPGGFIKRE GRATAQATLS ARLIDRPIRP LFPKGFRNEI HVVATILSVE
KDNAPDVTAI TGASVALSIS DIPFAGPVAA VIVGLVDGEL IINPTVEQHQ KSDLHLAVAG
TKEAIMMVEG GANEVPEETM RDAIFFAHEE IKKIVDFQEN IIREVGLSKM QVEIPILDEE
IKKAVVEFAT PLFEEAVKNP DKKTREDQMD SSQKSVLQHF TESYPEEEKL IADVSDETMK
AVVRKMALEE GERVDGRKLD EIRKVSCEVG FLPRPHGSGL FTRGQTQVLS VTTLGAISEE
QRLDGLGIEE KKRYIHHYNF PPYSTGETKP MRGPGRREIG HGALAERALL AVIPSEEEFP
YTIRVVSEVL ESNGSSSMGS VCGSTLSLMH AGVPIKAPVS GIAMGLVKEG ERFAIMSDIQ
GIEDALGDMD FKLAGTEKGV TALQMDIKIT GVNREIVEAA LKQAREGRMF ILKKMLEAID
KPNEELSPYA PQMIRMQIDP DKIREVIGPG GKTIHKIVDE TGCKIDIEDD GSLFIMATDE
EAAKKARFFV ESIVAEVEVG KTYMGTVKRI MDFGAFVEII PGVLGTSGKE GLVHISQLAE
ERVNKVRDVV DIGDQILVKV TEIDRQGRVN LSRKAVLKSA VKK
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